G2038795


Basic Information

Item Value
gene id G2038795
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 134981 ~ 135269 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2332435
gtaaggtgagtgatggggtgctcctggaagtgggttatgagttccgtttgtaggtgtgcccttttaatgttatacaggtgttgtttgagtctggtttctatggtgtgtttggtttctccaatgtattgtttattgcaaagtgtacatgtGATTATATAAATGGTGTTATGTGTGTTCAATGAATAGGATTCTTGTACTGGTGCTGATGTgtggctgtgtatatttgtaatgaactttatctgtcgaaaatggaaattatgaggtttgaggtcttgtggtggcttactac

Function

NR:

description
hypothetical protein EH28_00382

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2332435 True 289 lncRNA 0.39 1 134981 135269

Neighbor

gene id symbol gene type direction distance location
LOC110507290 LOC106580666 coding upstream 83046 218315 ~ 305904 (-)
LOC110507294 LOC106580668 coding upstream 320783 456052 ~ 470573 (-)
LOC110507295 LOC106580669 coding upstream 351953 487222 ~ 495836 (-)
LOC118944766 NA coding upstream 386050 521319 ~ 523145 (-)
LOC110507297 LOC106580671 coding upstream 559922 695191 ~ 731585 (-)
G2038793 NA non-coding downstream 10481 124270 ~ 124500 (-)
G2038501 NA non-coding downstream 92602 37589 ~ 42379 (-)
G2038798 NA non-coding upstream 32119 167388 ~ 202116 (-)
G2038808 NA non-coding upstream 74837 210106 ~ 210577 (-)
G2038809 NA non-coding upstream 75318 210587 ~ 211311 (-)
G2038909 LOC106580667 non-coding upstream 287778 423047 ~ 426644 (-)
G2039032 NA non-coding upstream 476549 611818 ~ 612167 (-)
LOC110507298 spcs2 other upstream 634705 769005 ~ 776178 (-)
G2041883 NA other upstream 2760307 2895576 ~ 2896391 (-)
G2041885 NA other upstream 2763718 2898987 ~ 2899388 (-)
G2042608 NA other upstream 3265310 3400579 ~ 3402997 (-)
LOC110507356 LOC106580682 other upstream 3403915 3539029 ~ 3718487 (-)

Expression


Co-expression Network