G2038809


Basic Information

Item Value
gene id G2038809
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 210587 ~ 211311 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2332476
TCCAGCATCTTTTGCATGAAGTCAATAAAATTACGCTTCATGTCAGGCTTTTTGTCTAAAGTCCTGCGAAGTGATGCGAGGCGGTTCATGGCCTGCTCCCTGTTATTAGGGAGGCGACGTCTAGTGGGGCGAAAGGGTAGTGGAGCCACCCAGTTGTTTCCATCATCCTGGAAAAcctgtttgtccataatgtccaAGAATGCTTTGTCCTCCACTGATGGTGCTGGTTTATCATCGTTTTGTCGAACACGGAACATCCCAGGCTGTCTATGTTTACAGTTGTGATTGGATCTCTTGAGTGCACTGTAGAGGGAGAGATGTGTTTCTGAGCTACGCTGTTGTAGTTCTCTTTTACCTGGATGATGTCAGGGCAAGGGCTCAGATAGGATGTGCGACCATTTTGAAGTATGTTTGTCCTGAACACGTTAACATTGGCTGGTCGGTGAGCCGTTCCCAGACAGACCTCACCTACGATGACCCACCCGAGGTCGAGTCACTGTGCATAAGGAGTGTCGTGGGGCCCATTGATTTGCCCTCGTACCTTGTGTACCCTTAAGATGTTTCATCCTAAGAGCAGGAGGATGGGAGCGTCTGGGTCCACAGCTGGAATTTTGTCCATAACTGGTTGCAGATGGGGATGATGATACGCAATGTCGTGGGAGGGAATCTCCATCCTATCGTCTGGCATCATATCACACTCTATCAGAGTAGGGAGAATGAGCTGC

Function

NR:

description
uncharacterized protein LOC110498840

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2332476 True 725 lncRNA 0.49 1 210587 211311

Neighbor

gene id symbol gene type direction distance location
LOC110507290 LOC106580666 coding upstream 7004 218315 ~ 305904 (-)
LOC110507294 LOC106580668 coding upstream 244741 456052 ~ 470573 (-)
LOC110507295 LOC106580669 coding upstream 275911 487222 ~ 495836 (-)
LOC118944766 NA coding upstream 310008 521319 ~ 523145 (-)
LOC110507297 LOC106580671 coding upstream 483880 695191 ~ 731585 (-)
G2038808 NA non-coding downstream 10 210106 ~ 210577 (-)
G2038798 NA non-coding downstream 8471 167388 ~ 202116 (-)
G2038795 NA non-coding downstream 75318 134981 ~ 135269 (-)
G2038793 NA non-coding downstream 86087 124270 ~ 124500 (-)
G2038501 NA non-coding downstream 168208 37589 ~ 42379 (-)
G2038909 LOC106580667 non-coding upstream 211736 423047 ~ 426644 (-)
G2039032 NA non-coding upstream 400507 611818 ~ 612167 (-)
G2039458 NA non-coding upstream 566465 777776 ~ 777993 (-)
defb4 NA non-coding upstream 603156 814467 ~ 816586 (-)
G2039501 rhbdd1 non-coding upstream 637641 848952 ~ 861381 (-)
LOC110507298 spcs2 other upstream 558663 769005 ~ 776178 (-)
G2041883 NA other upstream 2684265 2895576 ~ 2896391 (-)
G2041885 NA other upstream 2687676 2898987 ~ 2899388 (-)
G2042608 NA other upstream 3189268 3400579 ~ 3402997 (-)
LOC110507356 LOC106580682 other upstream 3327873 3539029 ~ 3718487 (-)

Expression


Co-expression Network