G2041815


Basic Information

Item Value
gene id G2041815
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 2788756 ~ 2789693 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2335831
AGAACGCATATGGTATTGTCCCATGGCACAAATCAAGAGTTCTATTTTTCCCAGTGTGACATTTCATATACTGGTGGTATTTGCGCAGGACTTTGTGCAAGGTACAGTTGTTAAAATCCCCTAAAATAAATTTGGGTGCGTCGGGGGAGATGGATTCCAGTTTCTGTGACAGATTATAAATAATCTCTGATGCCTTTGTTATATTAGCTTTAGATTGAATGTACACAACGGTAACAAACAATTGGGGGAACTCACGGGTGCAGAGAGCAAAGTCGCAGTGACACAGACAGCAGTTCAATGTCGGGGGTACAGAGAGTCTCTCTTACCAGGATCCATTTACACCACTGGTCCCTGACAAGCAGGCAGATGCCCCCGTCGTGAAGTTTCCCTGTGACTGTCAGATCATGGTCCGCTCTGACCAGAGTGAACCCGGCCGGCTCCTCTTCTCTGTACGGGACTCTGTCATCCAGCCAAGTCTCAGTAAACGCCAGCAAACAGGCCTCCCGATATTCGTGTTGGAAGTGCAAATTCGCTGACAGCTCATCCGCTTTCCCCCTCAGTGACTGGGCATTAATCAGCAAGGTGGTGGGTAAGGGAAGTTTGTTCTTCGATTTTTTAAAGTCTTTGTCTGATTCCCCCGCGTTTTCCACATTTGCATTTGGGTTTGTAATCCATTCGCAGACAATCAGGGATTAGATGGGCCATTGGGATATCCACAGCGTTTGTGTTTGAGTTGCATTGTAGTAAGAACCCTTTGCTGTATTGGATTCCGCTGCCAGCAGCATCGCTCAGTTTGGAATTTGTTCAGATTTCTCTCTACAGAAACTGCACATTGAGCTCACAGGAAAAAAACAGAATGAAAtagaattcaaataattgaaccgacgTCGGTCAATTTGTAATaattggaatagggtgccatttggggcgtgCCCCCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2335831 True 938 lncRNA 0.46 1 2788756 2789693

Neighbor

gene id symbol gene type direction distance location
LOC110507328 LOC106580643 coding downstream 246472 2518713 ~ 2542284 (-)
wdr95 LOC106580697 coding downstream 323278 2432760 ~ 2465478 (-)
LOC110507325 LOC106612440 coding downstream 382538 2225711 ~ 2406218 (-)
LOC110507323 NA coding downstream 616969 1977082 ~ 2171787 (-)
n4bp2l2 LOC106580637 coding downstream 822105 1937827 ~ 1966651 (-)
LOC110507043 LOC106603827 coding upstream 146835 2936528 ~ 2940847 (-)
LOC110507338 LOC106603753 coding upstream 156229 2945922 ~ 2956588 (-)
LOC118944748 NA coding upstream 166947 2956640 ~ 2961498 (-)
tsen34 tsen34 coding upstream 447708 3237401 ~ 3240233 (-)
LOC110507346 eif2a coding upstream 458117 3247810 ~ 3255113 (-)
G2041814 NA non-coding downstream 693 2787798 ~ 2788063 (-)
G2041813 NA non-coding downstream 1080 2787387 ~ 2787676 (-)
G2041812 NA non-coding downstream 2409 2785762 ~ 2786347 (-)
G2041811 NA non-coding downstream 3394 2785141 ~ 2785362 (-)
G2041777 LOC107758061 non-coding downstream 4969 2744106 ~ 2783787 (-)
G2041818 NA non-coding upstream 4666 2794359 ~ 2794560 (-)
G2041819 NA non-coding upstream 4933 2794626 ~ 2795167 (-)
G2041786 rnpepl1 non-coding upstream 8777 2798470 ~ 2802100 (-)
G2041820 NA non-coding upstream 13694 2803387 ~ 2803624 (-)
G2041821 NA non-coding upstream 14029 2803722 ~ 2803929 (-)
LOC110507298 spcs2 other downstream 2018019 769005 ~ 776178 (-)
G2041883 NA other upstream 105883 2895576 ~ 2896391 (-)
G2041885 NA other upstream 109294 2898987 ~ 2899388 (-)
G2042608 NA other upstream 610886 3400579 ~ 3402997 (-)
LOC110507356 LOC106580682 other upstream 749491 3539029 ~ 3718487 (-)
G2043460 NA other upstream 1553906 4343599 ~ 4348409 (-)

Expression


Co-expression Network