G2082006


Basic Information

Item Value
gene id G2082006
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 39672732 ~ 39681547 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2380638
TTGATATTTATTTCCGTAAAAGAGTGAATATAGCTGGTCTCCAAATCCACCTGCACGCCTCTTCACAAGACCACACTATTTTAAACTGTCTTCAAAAGCCTGCACTAAATCAACAACTCATAAGGCATGTTAGTTCATCAGTATTTTAGCCGGGTACTTctagcgtgggggggggggggggggggggggactaaaatAGAATTACTAAGATTCTGTGTTtacatacgtatatatatatatttaatctgcacaagttttttttttttttttttttgcaataaaTATCTAGTCTTATATATAACACGGTAGTAAATGTACAGGAATATAATGGCGTTGATTTGGGAGACACCTGAAACGacagagcatgtgtgtgtgtgaggctagTGAAATTAAAGGGGCAGTGCACAGATGTCTAATGGCTGTCTACTGATCCAATAGACCATAGAAACCATTTAACTtttctttatatatatttacatctctctctccctctctcttaccaaGTGGTTAAAGCTTACAGTATCAAAACACAGTCACATTATTTGTATATATCAATATATATcaaatagaatatagaatatagaataggaATCATGTACATTCTCGATAAGAGTATAAAAACACAGCCGACGATGGGGAGAGGAAAGGTTGCGTTTATGGCGTCGTTTTGCCTGGATCTGATTGGCTTTGAGCATATGACCTCATAGCAGGATAGCAGCACACTGGAATCCCATTGGTCGTCGTCATAGTTACATGGAGTCATTGTCGAAGTCGGTAGGCTCAATGACCTCTGGTGTCATAACCCTTCCCATGAACAGGATAGAacCTGTCCTGCGGTTTCTGATGATGAAGAAGAAGGGATGATCAGCCATGACCTGAGGGTACAGAACCAGAGTCCTGGTGAGGGCTATCATTCCTGATCCTGCAGCTCCCTCCGCCCCCTCCTCGGTCACCTCCAGGTAGGCTTTCTGCACCGCCTTTCCAATGAACAGGTCCTTACCAtCTGTCATGGCAGAGAGGTCAGCGTCTTTACTGAAGATGTTCTTGATGCCCAGATCCTGCAGAGCCTCCTTCAGGTAGACCTCCACCTTCTGCCTCTTGACGTtgttggcccactcctccaagAGAGGGGCTCTGATGATTGGCTCCAGGACTGCCAGGGGGACTTCCTGTCTGGGTAACACCACCAGCATGCTCATGTCCTCTCCTTCATAGGGCATCTCCAACACCTGGTACACACCACCTGCCTCGGATGAACCATCACTGAactca
>TU2380639
GAAACCTACCGCTGCTTGTTCCTCAGACTTTTCCCCACAACCACTTCAATTAAATACCAATAATAACATCTCATCTGTCATGGGAGAGgtctgtttgtttgtatgtgtgtgtgtgtgtgtgtctgcgtctgtcagtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtcatgggcAAGGCTTTTACTCGCCATCTCACCTGTCATGGCAGAGAGGTCAGCGTCTTTACTGAAGATGTTCTTGATGCCCAGATCCTGCAGAGCCTCCTTCAGGTAGACCTCCACCTTCTGCCTCTTGACGTtgttggcccactcctccaagAGAGGGGCTCTGATGATTGGCTCCAGGACTGCCAGGGGGACTTCCTGTCTGGGTAACACCACCAGCATGCTCATGTCCTCTCCTTCATAGGGCATCTCCAACACCTGGTACACACCACCTGCCTCGGATGAACCATCACTGAactca

Function

NR:

description
neuroserpin

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2380638 False 1272 lncRNA 0.44 5 39672732 39681547
TU2380639 True 473 TUCP 0.51 2 39672732 39673453

Neighbor

gene id symbol gene type direction distance location
LOC110508029 LOC106581420 coding downstream 55042 39601755 ~ 39617690 (-)
LOC110508001 LOC106581419 coding downstream 71750 39559953 ~ 39600982 (-)
LOC110508004 NA coding downstream 1053105 38616690 ~ 38619627 (-)
LOC110508020 LOC107705757 coding downstream 1803210 37820452 ~ 37869522 (-)
LOC110508019 LOC106581425 coding downstream 1865682 37778910 ~ 37807050 (-)
LOC110508033 LOC106581436 coding upstream 33171 39714718 ~ 39750640 (-)
LOC110508032 LOC106581440 coding upstream 73020 39754567 ~ 39774634 (-)
LOC110508030 LOC106581433 coding upstream 153457 39835004 ~ 39848132 (-)
LOC100136245 LOC106581444 coding upstream 282277 39963824 ~ 39975210 (-)
lekr1 LOC106581448 coding upstream 302998 39984103 ~ 40190414 (-)
G2081997 NA non-coding downstream 15619 39656855 ~ 39657113 (-)
G2081993 NA non-coding downstream 19532 39652988 ~ 39653200 (-)
G2081987 NA non-coding downstream 30033 39642422 ~ 39642699 (-)
G2081985 NA non-coding downstream 35078 39637429 ~ 39637654 (-)
G2081977 NA non-coding downstream 63062 39608730 ~ 39609670 (-)
G2082013 NA non-coding upstream 23936 39705483 ~ 39705686 (-)
G2082033 NA non-coding upstream 62027 39743574 ~ 39765159 (-)
G2082130 NA non-coding upstream 244954 39926501 ~ 39926769 (-)
G2082136 NA non-coding upstream 252074 39933621 ~ 39933866 (-)
G2082137 NA non-coding upstream 254521 39936068 ~ 39937211 (-)
G2081616 NA other downstream 239034 39433278 ~ 39433698 (-)
G2081106 NA other downstream 734787 38937211 ~ 38937945 (-)
G2080063 NA other downstream 1688051 37984225 ~ 37984681 (-)
G2079746 NA other downstream 2258518 37409233 ~ 37414330 (-)
cep57 LOC106581428 other downstream 2388652 37277694 ~ 37295837 (-)
LOC110508038 LOC106581456 other upstream 939073 40620620 ~ 40654523 (-)
LOC110507273 LOC106581487 other upstream 1199298 40878111 ~ 40883459 (-)
LOC110508045 LOC106581475 other upstream 1293162 40967894 ~ 40977862 (-)
G2083443 NA other upstream 1741992 41423539 ~ 41424040 (-)

Expression


Co-expression Network