G2082944


Basic Information

Item Value
gene id G2082944
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 40860084 ~ 40867423 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2381822
TATTtcatgagaatttgtaagattcttgtttgcataaaatagacggagaccagtcttatcaataataggtaacagaatttattctcggagcgcgctgccacgttaccacgagcaacagtttatatacaataacattacgtcatttcattgcttaacagaatcccctcctccAGACCGGGTCAAAGAGAACTTTAAAGGTTCATTCTGAGTTCATTCTGACCCCCCTAGCAcatacacaggacacacaacacaactgaattaacttttgacccctcaacattatcgatcaccacttagctgacagttctaattaacagaaaacctaggaatgcactcactgtcttatctaaaacaccccagagctaagttttgtcggttcaaccataggttaactaccTTATCTGCTTACTTAATCCACAACCCATTCGTTTCTGCCTAGTTGGAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2381822 True 446 lncRNA 0.40 2 40860084 40867423

Neighbor

gene id symbol gene type direction distance location
LOC110508043 LOC106581485 coding downstream 6034 40847274 ~ 40854050 (-)
LOC110508038 LOC106581456 coding downstream 205561 40620620 ~ 40654523 (-)
LOC110508039 LOC106581455 coding downstream 253237 40601473 ~ 40606847 (-)
LOC110508036 kcnab1 coding downstream 295683 40299870 ~ 40564401 (-)
LOC110508035 tiparp coding downstream 608369 40223863 ~ 40251715 (-)
LOC110507273 LOC106581487 coding upstream 10688 40878111 ~ 40883459 (-)
LOC110507274 LOC106581485 coding upstream 40939 40908362 ~ 40913641 (-)
LOC110507275 LOC106581486 coding upstream 60964 40928387 ~ 40933600 (-)
LOC118944770 LOC106581475 coding upstream 76905 40944328 ~ 40952721 (-)
LOC110508046 LOC106581475 coding upstream 88420 40955843 ~ 40963116 (-)
G2082885 NA non-coding downstream 19056 40840572 ~ 40841028 (-)
G2082884 NA non-coding downstream 19551 40840187 ~ 40840533 (-)
G2082850 LOC106581453 non-coding downstream 91977 40765276 ~ 40768107 (-)
G2082799 NA non-coding downstream 154322 40677565 ~ 40705762 (-)
G2082784 NA non-coding downstream 187566 40671694 ~ 40672518 (-)
LOC110508045 LOC106581475 non-coding upstream 106711 40967894 ~ 40977862 (-)
G2083118 NA non-coding upstream 178236 41045659 ~ 41045898 (-)
G2083126 NA non-coding upstream 191209 41058632 ~ 41115832 (-)
G2083178 NA non-coding upstream 286595 41154018 ~ 41154490 (-)
G2083189 NA non-coding upstream 302717 41170140 ~ 41170468 (-)
lekr1 LOC106581448 other downstream 672519 39984103 ~ 40190414 (-)
G2082006 NA other downstream 1186631 39672732 ~ 39681547 (-)
G2081616 NA other downstream 1426386 39433278 ~ 39433698 (-)
G2081106 NA other downstream 1922139 38937211 ~ 38937945 (-)
G2083443 NA other upstream 556116 41423539 ~ 41424040 (-)
LOC118944786 LOC106581464 other upstream 808828 41573411 ~ 41680789 (-)
G2084740 LOC106613316 other upstream 1917204 42784627 ~ 42785035 (-)

Expression


Co-expression Network