Gene
RNA
| Item | Value |
|---|---|
| gene id | G2083686 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 41603398 ~ 41611104 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| endo-1,4-beta-xylanase B-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2382674 | True | 632 | lncRNA | 0.44 | 2 | 41603398 | 41611104 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508054 | LOC106613305 | coding | downstream | 190106 | 41362562 ~ 41413292 (-) |
| LOC110507281 | LOC106581467 | coding | downstream | 289688 | 41309176 ~ 41313710 (-) |
| LOC110507280 | LOC106581477 | coding | downstream | 315969 | 41282753 ~ 41287429 (-) |
| LOC110507279 | LOC106581477 | coding | downstream | 329107 | 41267775 ~ 41274291 (-) |
| LOC110508053 | LOC106581466 | coding | downstream | 355576 | 41242573 ~ 41247822 (-) |
| LOC110508065 | LOC106581500 | coding | upstream | 195604 | 41806708 ~ 41809013 (-) |
| LOC110508063 | LOC106581498 | coding | upstream | 315813 | 41926917 ~ 42107164 (-) |
| aadac | LOC106613299 | coding | upstream | 650926 | 42262030 ~ 42285545 (-) |
| neu4 | LOC106581489 | coding | upstream | 905423 | 42516527 ~ 42540340 (-) |
| LOC110508058 | LOC106581494 | coding | upstream | 950466 | 42561570 ~ 42564580 (-) |
| G2083674 | NA | non-coding | downstream | 16115 | 41586592 ~ 41587283 (-) |
| G2083679 | NA | non-coding | downstream | 19082 | 41583756 ~ 41584316 (-) |
| G2083677 | NA | non-coding | downstream | 23574 | 41579138 ~ 41579824 (-) |
| G2083664 | NA | non-coding | downstream | 41256 | 41561356 ~ 41562142 (-) |
| G2083654 | NA | non-coding | downstream | 54783 | 41545346 ~ 41548615 (-) |
| G2083694 | NA | non-coding | upstream | 34326 | 41645430 ~ 41646574 (-) |
| G2083696 | NA | non-coding | upstream | 37796 | 41648900 ~ 41650147 (-) |
| G2083698 | NA | non-coding | upstream | 50205 | 41661309 ~ 41661652 (-) |
| G2083706 | NA | non-coding | upstream | 89319 | 41700423 ~ 41709292 (-) |
| G2083739 | NA | non-coding | upstream | 135116 | 41746220 ~ 41746491 (-) |
| G2083443 | NA | other | downstream | 179358 | 41423539 ~ 41424040 (-) |
| LOC110508045 | LOC106581475 | other | downstream | 628191 | 40967894 ~ 40977862 (-) |
| LOC110507273 | LOC106581487 | other | downstream | 722161 | 40878111 ~ 40883459 (-) |
| LOC110508038 | LOC106581456 | other | downstream | 981704 | 40620620 ~ 40654523 (-) |
| lekr1 | LOC106581448 | other | downstream | 1415833 | 39984103 ~ 40190414 (-) |
| LOC118944786 | LOC106581464 | other | upstream | 65147 | 41573411 ~ 41680789 (-) |
| G2084740 | LOC106613316 | other | upstream | 1173523 | 42784627 ~ 42785035 (-) |
| G2085726 | NA | other | upstream | 2301056 | 43912160 ~ 43912680 (-) |
| G2086783 | NA | other | upstream | 3309805 | 44920909 ~ 44921312 (-) |
| G2087090 | LOC106593344 | other | upstream | 3919252 | 45530356 ~ 45530780 (-) |
