G2084468


Basic Information

Item Value
gene id G2084468
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 42580066 ~ 42580619 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2383586
acagtgcacattaatcaacgtttcagtaaaagtgccggttttagccagccggctaattttcaaccgcagtccctgggcaggttattaaaaacaattacaatatagacaatagcagcatagaacaagcaagacagagcaacataggacaagcaagacgcagcatacagacagagcaacataggacaagcaagacgcagcatacagacagagcaacataaaataaaaagcagcaagacaaaattcataaaagcaacaaagtgtttccacacctcacaagctacagacaacatggaaagcgacTTCAAAACACACCTCTCTCATTCACGAGGCTGTTGGTCTCGGAGAGAGGTGAACAGAGAGGCCTGACAAGATGGACACTGCCCTGCCTTGGACACCgccctgccgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtctgtgtctgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgcacttgcgtGCGAATCTAAGATGCAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2383586 True 517 lncRNA 0.47 2 42580066 42580619

Neighbor

gene id symbol gene type direction distance location
LOC110508058 LOC106581494 coding downstream 15486 42561570 ~ 42564580 (-)
neu4 LOC106581489 coding downstream 39726 42516527 ~ 42540340 (-)
aadac LOC106613299 coding downstream 294521 42262030 ~ 42285545 (-)
LOC110508063 LOC106581498 coding downstream 472902 41926917 ~ 42107164 (-)
LOC110508065 LOC106581500 coding downstream 771053 41806708 ~ 41809013 (-)
LOC118944772 LOC106581517 coding upstream 66525 42647144 ~ 42649901 (-)
LOC110519585 LOC106581519 coding upstream 715192 43295811 ~ 43529347 (-)
LOC110508094 tnfaip1 coding upstream 954936 43535555 ~ 43549204 (-)
tmem97 tmem97 coding upstream 975957 43556576 ~ 43558533 (-)
LOC110508089 LOC106581526 coding upstream 1156451 43737070 ~ 43762876 (-)
G2084436 NA non-coding downstream 23768 42556070 ~ 42556298 (-)
G2084429 NA non-coding downstream 47557 42523685 ~ 42532509 (-)
G2084420 NA non-coding downstream 63630 42516041 ~ 42516436 (-)
G2084421 NA non-coding downstream 67283 42511712 ~ 42512783 (-)
G2084481 NA non-coding upstream 39576 42620195 ~ 42620617 (-)
G2084484 NA non-coding upstream 47103 42627722 ~ 42629236 (-)
G2084495 NA non-coding upstream 61319 42641938 ~ 42642251 (-)
G2084505 NA non-coding upstream 69315 42649934 ~ 42650551 (-)
LOC118944786 LOC106581464 other downstream 899374 41573411 ~ 41680789 (-)
G2083443 NA other downstream 1156026 41423539 ~ 41424040 (-)
LOC110508045 LOC106581475 other downstream 1604859 40967894 ~ 40977862 (-)
LOC110507273 LOC106581487 other downstream 1698829 40878111 ~ 40883459 (-)
LOC110508038 LOC106581456 other downstream 1958372 40620620 ~ 40654523 (-)
G2084740 LOC106613316 other upstream 204008 42784627 ~ 42785035 (-)
G2085726 NA other upstream 1331541 43912160 ~ 43912680 (-)
G2086783 NA other upstream 2340290 44920909 ~ 44921312 (-)
G2087090 LOC106593344 other upstream 2949737 45530356 ~ 45530780 (-)
G2087288 NA other upstream 3216451 45797070 ~ 45798330 (-)

Expression


Co-expression Network