G2084818


Basic Information

Item Value
gene id G2084818
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 42958980 ~ 42964591 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2384034
gaacactaacacactagatgaacatacggaacaccaaCACACAAGGGAACATACGGAACACCAACACACAAGGGAACATACGGAACAccaacacactagatgaacatacggaacaccaaCACACAAGGGAACATACGGAACAccaacacactagatgaacatacggaacaccaacacactagatgaacatacggaacaccaacacacaagatgaacatacggaacaccaccacacaagatgaacatacggaacactaacacacaagatgaacatacggaacactaacacactagatgaacatacggaacaccaacacactagatgaacatacggaacaccaccacactagatgaacatacggaacactaacacacaagatgaacatacggaacaccaacacactagatgaacatacggaacactaacacactagatgaacatacggaacaccaccacactagatgaacatacggaacaccaccacactagatgaacatacggaacaccaccacactagatgaacatacggaacaccaCCACACTAGATGAACATAAGGAACAccaacacactagatgaacatacggaacaccaCCACACTAGATGAACATAAGGAACAccaacacactagatgaacacacggaacactaacacactagatgaacatacggaacactaacacactagatgaacatacggaacaccaacacactagatgaacatacggaacaccaccacactagatgaacatacggaacactaacacactagatgaacatacggaacactaacacactagatgaacatacggaacaccaacacactagatgaacatacggaacaccaccacactagatgaacatacggaacactaacacactagatgaacatacggaaca
>TU2384039
gaacactaacacactagatgaacatacggaacaccaaCACACAAGGGAACATACGGAACACCAACACACAAGGGAACATACGGAACAccaacacactagatgaacatacggaacaccaaCACACAAGGGAACATACGGAACAccaacacactagatgaacatacggaacaccaacacactagatgaacatacggaacaccaacacacaagatgaacatacggaacaccaccacacaagatgaacatacggaacactaacacacaagatgaacatacggaacactaacacactagatgaacatacggaacaccaacacactagatgaacatacggaacaccaccacactagatgaacatacggaacactaacacacaagatgaacatacggaacaccaacacactagatgaacatacggaacactaacacactagatgaacatacggaacaccaccacactagatgaacatacggaacaccaccacactagatgaacatacggaacaccaccacactagatgaacatacggaacaccaCCACACTAGATGAACATAAGGAACAccaCCACACTAGATGAACATAAGGAACAccaacacactagatgaacacacggaacactaacacactagatgaacatacggaacactaacacactagatgaacatacggaacaccaacacactagatgaacatacggaacaccaccacactagatgaacatacggaacactaacacactagatgaacatacggaacactaacacactagatgaacatacggaacaccaacacactagatgaacatacggaacaccaccacactagatgaacatacggaacactaacacactagatgaacatacggaaca
>TU2384041
tagatgaacatacggaacactaacacactagatgaacatacggaacaccaCCACACTAGATGAACATAAGGAACAccaCCACACTAGATGAACATAAGGAACAccaacacactagatgaacacacggaacactaacacactagatgaacatacggaacactaacacactagatgaacatacggaacaccaacacactagatgaacatacggaacaccaccacactagatgaacatacggaacactaacacactagatgaacatacggaacactaacacactagatgaacatacggaacaccaacacactagatgaacatacggaacaccaccacactagatgaacatacggaacactaacacactagatgaacatacggaaca
>TU2384040
gaacactaacacactagatgaacatacggaacaccaaCACACAAGGGAACATACGGAACACCAACACACAAGGGAACATACGGAACAccaacacactagatgaacatacggaacaccaaCACACAAGGGAACATACGGAACAccaacacactagatgaacatacggaacaccaacacactagatgaacatacggaacaccaacacacaagatgaacatacggaacaccaccacacaagatgaacatacggaacactaacacacaagatgaacatacggaacactaacacactagatgaacatacggaacaccaacacactagatgaacatacggaacaccaccacactagatgaacatacggaacactaacacacaagatgaacatacggaacaccaacacactagatgaacatacggaacactaacacactagatgaacatacggaacaccaccacactagatgaacatacggaacaccaccacactagatgaacatacggaacaccaccacacaagatgaacatacggaacactaacacactagatgaacatacggaacaccaacacactagatgaacatacggaacaccaccacactagatgaacatacggaacaccaccacactagatgaacatacggaacactaacacactagatgaacatacggaacaccaacacactagatgaacatacggaacaccaccacactagatgaacatacggaacactaacacactagatgaacatacggaacactaacacactagatgaacatacggaacaccaacacactagatgaacatacggaacaccaccacactagatgaacatacggaacaccaacacactagatgaacatacggaacactaacacacaagggaacatacggaacactaacacacaagggaacatacggaacactaacacactagatgaacatacggaacactaacacactagatgaacatacggaacaccaacacacaagatgaacatacggaacaccaacacacaagatgaacatacggaacaccaacacacaagatgaacatacggaacactaacacacaagatgaacatacggaacaccaacacacaagatgaacatacggaacaccaacacacaagatgaacatacggaacactaacacactagatgaacatacggaacaccaacacacaagatgaacatacggaacaccaacacacaagatgaacatacggaacaccaacacactagatgaacatacggaacgctaacacactagatgaacatacggaacactaacacactagatgaacatacggaacaccaccacactagatgaacatacggaacactaacacactagatgaacatacggaacatcaacacactagatgaacatacggaacactaacacacaagggaacatacggaa
>TU2384042
gaacactaacacactagatgaacatacggaacaccaaCACACAAGGGAACATACGGAACACCAACACACAAGGGAACATACGGAACAccaacacactagatgaacatacggaacaccaaCACACAAGGGAACATACGGAACAccaacacactagatgaacatacggaacaccaacacactagatgaacatacggaacaccaacacacaagatgaacatacggaacaccaccacacaagatgaacatacggaacactaacacacaagatgaacatacggaacactaacacactagatgaacatacggaacaccaacacactagatgaacatacggaacaccaccacactagatgaacatacggaacactaacacacaagatgaacatacggaacaccaacacactagatgaacatacggaacactaacacactagatgaacatacggaacaccaccacactagatgaacatacggaacaccaccacactagatgaacatacggaacaccaccacactagatgaacatacggaacaccaccacactagatgaacatacggaacaccaccacactagatgaacatacggaacactaacacactagatgaacatacggaacaccaacacactagatgaacatacggaacaccaccacactagatgaacatacggaacactaacacactagatgaacatacggaacactaacacactagatgaacatacggaacaccaacacactagatgaacatacggaacaccaccacactagatgaacatacggaacaccaacacactagatgaacatacggaacactaacacacaagatgaacatacggaacactaacacacaagGGAACATACGGAACACCAACACACAAGggaacatacggaacactaacacacaagatgaacatacggaacaccaacacacaagatgaacatacggaacactaacacacaagatgaacatacggaacaccaacacacaagatgaacatacggaacaccaacacacaagatgaacatacggaacactaacacactagatgaacatacggaacaccaacacacaagatgaacatacggaacaccaacacacaagatgaacatacggaacaccaacacactagatgaacatacggaacgctaacacactagatgaacatacggaacactaacacactagatgaacatacggaacaccaccacactagatgaacatacggaacactaacacactagatgaacatacggaacatcaacacactagatgaacatacggaacactaacacacaagggaacatacggaa
>TU2384035
gaacactaacacactagatgaacatacggaacaccaaCACACAAGGGAACATACGGAACACCAACACACAAGGGAACATACGGAACAccaacacactagatgaacatacggaacaccaaCACACAAGGGAACATACGGAACAccaacacactagatgaacatacggaacaccaacacactagatgaacatacggaacaccaacacacaagatgaacatacggaacaccaccacacaagatgaacatacggaacactaacacacaagatgaacatacggaacactaacacactagatgaacatacggaacaccaacacactagatgaacatacggaacaccaccacactagatgaacatacggaacactaacacacaagatgaacatacggaacaccaacacactagatgaacatacggaacactaacacactagatgaacatacggaacaccaccacactagatgaacatacggaacaccaccacactagatgaacatacggaacaccaccacacaagatgaacatacggaacactaacacacaagatgaacatacggaacaccaacacactagatgaacatacggaacactaacacactagatgaacatacggaacactaacacactagatgaacatacggaacactaacacactagatgaacatacggaacaccaacacactagatgaacatacggaacaccaacacactagatgaacatacggaacactaacacactagatgaacatacggaacactaacacactagatgaacatacggaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2384034 False 898 lncRNA 0.43 4 42958980 42964591
TU2384039 False 870 lncRNA 0.43 4 42958980 42964591
TU2384041 False 383 lncRNA 0.42 2 42958980 42960871
TU2384040 False 1425 lncRNA 0.43 3 42962106 42964591
TU2384042 False 1313 lncRNA 0.43 4 42962106 42964591
TU2384035 True 785 lncRNA 0.43 3 42962942 42964591

Neighbor

gene id symbol gene type direction distance location
LOC118944772 LOC106581517 coding downstream 309079 42647144 ~ 42649901 (-)
LOC110508058 LOC106581494 coding downstream 394400 42561570 ~ 42564580 (-)
neu4 LOC106581489 coding downstream 418640 42516527 ~ 42540340 (-)
aadac LOC106613299 coding downstream 673435 42262030 ~ 42285545 (-)
LOC110508063 LOC106581498 coding downstream 851816 41926917 ~ 42107164 (-)
LOC110519585 LOC106581519 coding upstream 331220 43295811 ~ 43529347 (-)
LOC110508094 tnfaip1 coding upstream 570964 43535555 ~ 43549204 (-)
tmem97 tmem97 coding upstream 591985 43556576 ~ 43558533 (-)
LOC110508089 LOC106581526 coding upstream 772479 43737070 ~ 43762876 (-)
LOC110508088 LOC106581525 coding upstream 804649 43769240 ~ 43783275 (-)
G2084808 NA non-coding downstream 16515 42933657 ~ 42942465 (-)
G2084798 NA non-coding downstream 40426 42916704 ~ 42918554 (-)
G2084787 NA non-coding downstream 68569 42888049 ~ 42890411 (-)
G2084783 NA non-coding downstream 76993 42881635 ~ 42881987 (-)
G2084753 NA non-coding downstream 139146 42819623 ~ 42819834 (-)
G2084849 NA non-coding upstream 54844 43019435 ~ 43019880 (-)
G2084844 NA non-coding upstream 118427 43083018 ~ 43085645 (-)
G2084867 NA non-coding upstream 121725 43086316 ~ 43086618 (-)
G2084868 NA non-coding upstream 122146 43086737 ~ 43086968 (-)
G2084869 NA non-coding upstream 122608 43087199 ~ 43087871 (-)
G2084740 LOC106613316 other downstream 173945 42784627 ~ 42785035 (-)
LOC118944786 LOC106581464 other downstream 1278288 41573411 ~ 41680789 (-)
G2083443 NA other downstream 1534940 41423539 ~ 41424040 (-)
LOC110508045 LOC106581475 other downstream 1983773 40967894 ~ 40977862 (-)
LOC110507273 LOC106581487 other downstream 2077743 40878111 ~ 40883459 (-)
G2085726 NA other upstream 947569 43912160 ~ 43912680 (-)
G2086783 NA other upstream 1956318 44920909 ~ 44921312 (-)
G2087090 LOC106593344 other upstream 2565765 45530356 ~ 45530780 (-)
G2087288 NA other upstream 2832479 45797070 ~ 45798330 (-)
ndufc2 nduc2 other upstream 4007990 46972581 ~ 46975116 (-)

Expression


Co-expression Network