Gene
RNA
| Item | Value |
|---|---|
| gene id | G2084849 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 43019435 ~ 43019880 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| syntaxin-1A-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2384093 | False | 242 | lncRNA | 0.52 | 2 | 43019435 | 43019880 |
| TU2384094 | True | 242 | lncRNA | 0.52 | 2 | 43019571 | 43019880 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944772 | LOC106581517 | coding | downstream | 369534 | 42647144 ~ 42649901 (-) |
| LOC110508058 | LOC106581494 | coding | downstream | 454855 | 42561570 ~ 42564580 (-) |
| neu4 | LOC106581489 | coding | downstream | 479095 | 42516527 ~ 42540340 (-) |
| aadac | LOC106613299 | coding | downstream | 733890 | 42262030 ~ 42285545 (-) |
| LOC110508063 | LOC106581498 | coding | downstream | 912271 | 41926917 ~ 42107164 (-) |
| LOC110519585 | LOC106581519 | coding | upstream | 275931 | 43295811 ~ 43529347 (-) |
| LOC110508094 | tnfaip1 | coding | upstream | 515675 | 43535555 ~ 43549204 (-) |
| tmem97 | tmem97 | coding | upstream | 536696 | 43556576 ~ 43558533 (-) |
| LOC110508089 | LOC106581526 | coding | upstream | 717190 | 43737070 ~ 43762876 (-) |
| LOC110508088 | LOC106581525 | coding | upstream | 749360 | 43769240 ~ 43783275 (-) |
| G2084818 | NA | non-coding | downstream | 54844 | 42958980 ~ 42964591 (-) |
| G2084808 | NA | non-coding | downstream | 76970 | 42933657 ~ 42942465 (-) |
| G2084798 | NA | non-coding | downstream | 100881 | 42916704 ~ 42918554 (-) |
| G2084787 | NA | non-coding | downstream | 129024 | 42888049 ~ 42890411 (-) |
| G2084783 | NA | non-coding | downstream | 137448 | 42881635 ~ 42881987 (-) |
| G2084844 | NA | non-coding | upstream | 63138 | 43083018 ~ 43085645 (-) |
| G2084867 | NA | non-coding | upstream | 66436 | 43086316 ~ 43086618 (-) |
| G2084868 | NA | non-coding | upstream | 66857 | 43086737 ~ 43086968 (-) |
| G2084869 | NA | non-coding | upstream | 67319 | 43087199 ~ 43087871 (-) |
| G2084870 | NA | non-coding | upstream | 72426 | 43092306 ~ 43092693 (-) |
| G2084740 | LOC106613316 | other | downstream | 234400 | 42784627 ~ 42785035 (-) |
| LOC118944786 | LOC106581464 | other | downstream | 1338743 | 41573411 ~ 41680789 (-) |
| G2083443 | NA | other | downstream | 1595395 | 41423539 ~ 41424040 (-) |
| LOC110508045 | LOC106581475 | other | downstream | 2044228 | 40967894 ~ 40977862 (-) |
| LOC110507273 | LOC106581487 | other | downstream | 2138198 | 40878111 ~ 40883459 (-) |
| G2085726 | NA | other | upstream | 892280 | 43912160 ~ 43912680 (-) |
| G2086783 | NA | other | upstream | 1901029 | 44920909 ~ 44921312 (-) |
| G2087090 | LOC106593344 | other | upstream | 2510476 | 45530356 ~ 45530780 (-) |
| G2087288 | NA | other | upstream | 2777190 | 45797070 ~ 45798330 (-) |
| ndufc2 | nduc2 | other | upstream | 3952701 | 46972581 ~ 46975116 (-) |
