G2084871


Basic Information

Item Value
gene id G2084871
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 43092723 ~ 43094394 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2384117
TTTCACCCATATTTCACCTTTTCATAGAGAGATCATATTAATGTGTAGTCCTAACTGTTCGGACAATACCAACAGAAGATGGCAGATCGGCGGTACCGACTTCCGGCGTGTCCCGTGACGCAACCCAAATCGTTCAAAAgctacagatgtttttgtgagatcactgattttcaggatgtcttaCAGTCTGACGAACACCGCTGATGCGGAAGGCCGCCATTGGCGGATGTGagggattgagacgcagcccatgcaaaatgTATGCTAATTAGATTTACGCGGGGGCGTGGACATCAACTCTAGGTTAAGAAgtgaaattgtagaaataggcggggtttatgattgtggctgtggtaactagtgacgttAGTTACTCATTTCATGCAGCGTACCAGAGCAGTTCTTCCCctgtcatattagtttgtagcccagaTGCTACAGACAAAAGTTGGTACATCAGCATtactgacttcagacgagtcccgtgacacttgtgggggtcgtagagcaaaacggagcaCACCcttgtgttcgtgagagtcttcCCTCTGTAGGCGGATGTGAGAAGGCCGATCTTCAAGATGTcacctggtctgacaaacagtgtgtagctctgccactttccacTGCATAAGAGGAAGGGCGACGTAggtggatgcggtggattgagactcagTCCATGCAAGAAagcagatatctctagcttaaattgacagattttgtGGCAGATTTATTTACTATGTTACTTATATGGATGCACCGGTGCCTCAATAGACTCTAGGGGGTTAAATAATAAAAATCAACAAAACATACTGTAGCAATTTTTGCTTTCCATATTGGCGGGATTGCGTAGGTGGTTTGCCTTTTACGCTGGAGACTCAGGTTCGCTTCCCACTCCCTCCGTTCGctacactggtgtcagaagtgggatggtgGCTGTGAGGCAGTCCCACATGGCCCCAATGTGTGAGGGACACTTGTGGTTAGTCGAAGCACGTACCTTCCCGTTTGTAGGAGGCAGTCTAGTGATTCTCGCCACGTTACAATTAGTTATCGAGCCATCTTACCAGCACCAGCTAGCTTTCTAGCAGGTTGTTTAATGAAGGAGatatcattttttaaatgaacaTGTGAGATTTGTGAGATTAGAACAACTTTCCAATGATAAATATAGCTAGTTATCTACAAAAACAGAATCATACAATAAATCACCCCAAAAATGGCTCACTCACCATAACAGCAGATTGGTTCAAGTATCCTTTTGGAGCATGCAGCAGGTTTGAAATAAAATGTAAGCCCCGCCCTCGTAATTGAGTCAACCAACCACATTAATTCTTTCTTCGGGGCAGAGCTGCCTTCATGCCCTCGTTCATATTTTGTCGGGTAAATCGTAAATAGGACCTTCCTACTGGGATATATGCACTTGAACACCCCTCCAACTTGTCGTTACGACTAGGAAACTTGGCCATGATCTCTTTCCCACATGCTGAACACTGACTTCACGCACCACAAACATGACCGTGATTTCGGGTGGTCAATGGTGAGAACGGTTCTTGCTTTCCTTCTGAGCTCCGAGCACGTGAACGCTCCAAGTCTTTCGTCCGATCACTGCGACAGGACGTGAACGCGACATAAGTACATTAGTCATGACATTAAATGAGCACCTGCACAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2384117 True 1672 lncRNA 0.46 1 43092723 43094394

Neighbor

gene id symbol gene type direction distance location
LOC118944772 LOC106581517 coding downstream 442822 42647144 ~ 42649901 (-)
LOC110508058 LOC106581494 coding downstream 528143 42561570 ~ 42564580 (-)
neu4 LOC106581489 coding downstream 552383 42516527 ~ 42540340 (-)
aadac LOC106613299 coding downstream 807178 42262030 ~ 42285545 (-)
LOC110508063 LOC106581498 coding downstream 985559 41926917 ~ 42107164 (-)
LOC110519585 LOC106581519 coding upstream 201417 43295811 ~ 43529347 (-)
LOC110508094 tnfaip1 coding upstream 441161 43535555 ~ 43549204 (-)
tmem97 tmem97 coding upstream 462182 43556576 ~ 43558533 (-)
LOC110508089 LOC106581526 coding upstream 642676 43737070 ~ 43762876 (-)
LOC110508088 LOC106581525 coding upstream 674846 43769240 ~ 43783275 (-)
G2084870 NA non-coding downstream 30 43092306 ~ 43092693 (-)
G2084869 NA non-coding downstream 4852 43087199 ~ 43087871 (-)
G2084868 NA non-coding downstream 5755 43086737 ~ 43086968 (-)
G2084867 NA non-coding downstream 6105 43086316 ~ 43086618 (-)
G2084844 NA non-coding downstream 7078 43083018 ~ 43085645 (-)
G2084877 NA non-coding upstream 6219 43100613 ~ 43101041 (-)
G2084874 NA non-coding upstream 16536 43110930 ~ 43111637 (-)
G2084891 NA non-coding upstream 48893 43143287 ~ 43144830 (-)
G2084903 NA non-coding upstream 92406 43186800 ~ 43187012 (-)
G2084907 NA non-coding upstream 98059 43192453 ~ 43192663 (-)
G2084740 LOC106613316 other downstream 307688 42784627 ~ 42785035 (-)
LOC118944786 LOC106581464 other downstream 1412031 41573411 ~ 41680789 (-)
G2083443 NA other downstream 1668683 41423539 ~ 41424040 (-)
LOC110508045 LOC106581475 other downstream 2117516 40967894 ~ 40977862 (-)
LOC110507273 LOC106581487 other downstream 2211486 40878111 ~ 40883459 (-)
G2085726 NA other upstream 817766 43912160 ~ 43912680 (-)
G2086783 NA other upstream 1826515 44920909 ~ 44921312 (-)
G2087090 LOC106593344 other upstream 2435962 45530356 ~ 45530780 (-)
G2087288 NA other upstream 2702676 45797070 ~ 45798330 (-)
ndufc2 nduc2 other upstream 3878187 46972581 ~ 46975116 (-)

Expression


Co-expression Network