G2085562


Basic Information

Item Value
gene id G2085562
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 43596050 ~ 43596967 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2384960
agcgaggctctatacagtagagaggttatatacagtagagaggctatatacagtagagaggctatattcagtagagaggctatatacagtagagaggctatatacagtagagaggctatatacagtagagaggctatatacagtagagaggctatatacagtagagaggctatatacagtagagaggctatatacagtagagaggctacatacagtagagaggctatatacagtagagaggctatatacagtagagaggctatatacagtagagaggctatatacagtagagaggctatattcagtagagaggctatatacaggcaccggttagtcaggctgattgaggtagtatgtacatgtagatatggttaaggtgtgtctgtatgttctgggTCTTACCTCTGCAACCTTTGGAGGGACTCCGTCTCCCAGTACTTCTCTGTAGAAGCACTGTTGGGCCATGTAGTAGGACAGGCCACTGGTCCTCTTAAAGGCATCCTTCAGCCGCTTCAACTCCAC

Function

NR:

description
PREDICTED: voltage-dependent L-type calcium channel subunit alpha-1D-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2384960 True 522 lncRNA 0.44 3 43596050 43596967

Neighbor

gene id symbol gene type direction distance location
tmem97 tmem97 coding downstream 37517 43556576 ~ 43558533 (-)
LOC110508094 tnfaip1 coding downstream 46846 43535555 ~ 43549204 (-)
LOC110519585 LOC106581519 coding downstream 66703 43295811 ~ 43529347 (-)
LOC118944772 LOC106581517 coding downstream 946149 42647144 ~ 42649901 (-)
LOC110508058 LOC106581494 coding downstream 1031470 42561570 ~ 42564580 (-)
LOC110508089 LOC106581526 coding upstream 140103 43737070 ~ 43762876 (-)
LOC110508088 LOC106581525 coding upstream 172273 43769240 ~ 43783275 (-)
LOC110507241 LOC106581541 coding upstream 665998 44262965 ~ 44310016 (-)
gbe1b gbe1 coding upstream 765352 44362319 ~ 44721642 (-)
rwdd2b rwdd2b coding upstream 1838754 45435721 ~ 45442773 (-)
G2085558 NA non-coding downstream 8961 43586806 ~ 43587089 (-)
G2085557 NA non-coding downstream 10152 43585367 ~ 43585898 (-)
G2085499 NA non-coding downstream 41980 43549267 ~ 43554070 (-)
G2085533 NA non-coding downstream 51658 43542434 ~ 43544392 (-)
G2085532 NA non-coding downstream 53208 43541942 ~ 43542842 (-)
G2085571 LOC108425843 non-coding upstream 23549 43620516 ~ 43637291 (-)
G2085580 NA non-coding upstream 44064 43641031 ~ 43642190 (-)
G2085620 NA non-coding upstream 99617 43696584 ~ 43700316 (-)
G2085639 NA non-coding upstream 134436 43731403 ~ 43731732 (-)
G2085642 NA non-coding upstream 137415 43734382 ~ 43734631 (-)
G2084740 LOC106613316 other downstream 811015 42784627 ~ 42785035 (-)
LOC118944786 LOC106581464 other downstream 1915358 41573411 ~ 41680789 (-)
G2083443 NA other downstream 2172010 41423539 ~ 41424040 (-)
LOC110508045 LOC106581475 other downstream 2620843 40967894 ~ 40977862 (-)
LOC110507273 LOC106581487 other downstream 2714813 40878111 ~ 40883459 (-)
G2085726 NA other upstream 315193 43912160 ~ 43912680 (-)
G2086783 NA other upstream 1323942 44920909 ~ 44921312 (-)
G2087090 LOC106593344 other upstream 1933389 45530356 ~ 45530780 (-)
G2087288 NA other upstream 2200103 45797070 ~ 45798330 (-)
ndufc2 nduc2 other upstream 3375614 46972581 ~ 46975116 (-)

Expression


Co-expression Network