G2087063


Basic Information

Item Value
gene id G2087063
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 45468032 ~ 45490245 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2386943
TACAGTAAAACATGTTGCCTATTGAAATGAAGGTGCCATCGTAACGTCTCGTTTGAAttcaaaacaataaaaacatttgTAAGCCTACAATCAATACACtcatggtgaagaaggtgcaagtGTTTGCAATAGATCAGTAAGGAACGTCCTGTAGCAGATAATACACATTGGctaaatcccaaatggcaccctattgtctTTAGCGAACTACAATAGGCAACAGTGGTCAATTTGGGACGTACACATTGATTCCCTTCTACCCTACAATACTTTTTGTTATAATACCAGACAAAAATGTAACCGTTATACGTATTTGAAAAGACAGAATGTCATGTCATCGATATCATAAAATGTCTCAATTAATGCTCTTAAAAAACAAAATTGATGACTTGTTAAAATGAtcaaaaatgacaaaaaaaactaTCATGATCTTCATTTACCTCACTCAGCAAATCAAACTACTGATGGATGGGTGAATGAAAGAATGGCTGAACAGATTCATGAATTCAAATGAATTAATTCATGCCAGAGAGATGATGGTCAAAGtctattggctgtgtgcttggtaTTGTGCACCTACAGAGAATCTCAAATTTAGTGACAAAATACTGGATTCAAATTGAATGGCTATTATTTAAAGTGAGGAAATACTGTATTTCAAATTGAATAGCTTTTATGTTAAGTGAGAAATATTCTATTTAAATTGAATTGCATATTATGCTTATGACAAATACTGTATTTCAAATTGAATGGCTATTAGGTTCAGTGAGGAAATACTGTATTTAAATTGCATGGATATTATGCTGTACAGTTAGGGCAGCTAAAAAGCACATGTATATGTAGTCAGAAAGAGGTCCACATCCTACACCCTAACAGGTATGCATACTGTCACAAATATCATGGGGAAAAGGGGTACATGCATCCTGAAAACGTTACAGTAAATCCTTCAAAAAAGGTGTTTGTGACCGTCGTAGACCAGGGTTAGAACCCAGGTGTCCTGCTGTCACGATACTGTGTTGtaagcccactgagctaaagtctATTAGGTTCACACACCAAGTCCTTCAAAAgtgtctttaaaaaaacaaacaaacaaacaaacacgtcATTCTGCTCCACTTCAATTTTCAGATTGAATAGACTTTTCCCTGCTTCtacttctgcattgcttgctgtttgggggttttaggctgggtttctgtacagcacgttgagatatcagctgatgtaagaagggcttgataaatacatttgatttgatccttatctagtgcactaccttttgaccagagccctgtaggtcttggtcaaaagtaggacactgaatagtgtgccatttgggacgtaaactGAGACAGTGAATAACAGTGAGAGTTCATCTGAGCCATACAGTATAGAGTTATATCCAATAACAGATATATATTATCTATACAGTATAGAGTTATATCCAATAACAGATCTATATTATCTATAGTCTATACAGTATAGAGTTATATCCAATAACAGATCTATATTATCTATACAGTATAGAGTTATATCCAATAACAGATCTATATTATCTATACAGTATAGAGTTATATCCAATAACAGATCTAcagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagata
>TU2386944
TACAGTAAAACATGTTGCCTATTGAAATGAAGGTGCCATCGTAACGTCTCGTTTGAAttcaaaacaataaaaacatttgTAAGCCTACAATCAATACACtcatggtgaagaaggtgcaagtGTTTGCAATAGATCAGTAAGGAACGTCCTGTAGCAGATAATACACATTGGctaaatcccaaatggcaccctattgtctTTAGCGAACTACAATAGGCAACAGTGGTCAATTTGGGACGTACACATTGATTCCCTTCTACCCTACAATACTTTTTGTTATAATACCAGACAAAAATGTAACCGTTATACGTATTTGAAAAGACAGAATGTCATGTCATCGATATCATAAAATGTCTCAATTAATGCTCTTAAAAAACAAAATTGATGACTTGTTAAAATGAtcaaaaatgacaaaaaaaactaTCATGATCTTCATTTACCTCACTCAGCAAATCAAACTACTGATGGATGGGTGAATGAAAGAATGGCTGAACAGATTCATGAATTCAAATGAATTAATTCATGCCAGAGAGATGATGGTCAAAGtctattggctgtgtgcttggtaTTGTGCACCTACAGAGAATCTCAAATTTAGTGACAAAATACTGGATTCAAATTGAATGGCTATTATTTAAAGTGAGGAAATACTGTATTTCAAATTGAATAGCTTTTATGTTAAGTGAGAAATATTCTATTTAAATTGAATTGCATATTATGCTTATGACAAATACTGTATTTCAAATTGAATGGCTATTAGGTTCAGTGAGGAAATACTGTATTTAAATTGCATGGATATTATGCTGTACAGTTAGGGCAGCTAAAAAGCACATGTATATGTAGTCAGAAAGAGGTCCACATCCTACACCCTAACAGGTATGCATACTGTCACAAATATCATGGGGAAAAGGGGTACATGCATCCTGAAAACGTTACAGTAAATCCTTCAAAAAAGGTGTTTGTGACCGTCGTAGACCAGGGTTAGAACCCAGGTGTCCTGCTGTCACGATACTGTGTTGtaagcccactgagctaaagtctATTAGGTTCACACACCAAGTCCTTCAAAAgtgtctttaaaaaaacaaacaaacaaacaaacacgtcATTCTGCTCCACTTCAATTTTCAGATTGAATAGACTTTTCCCTGCTTCtacttctgcattgcttgctgtttgggggttttaggctgggtttctgtacagcacgttgagatatcagctgatgtaagaagggcttgataaatacatttgatttgatccttatctagtgcactaccttttgaccagagccctgtaggtcttggtcaaaagtaggacactgaatagtgtgccatttgggacgtaaactGAGACAGTGAATAACAGTGAGAGTTCATCTGAGCCATACAGTATAGAGTTATATCCAATAACAGATATATATTATCTATACAGTATAGAGTTATATCCAATAACAGATCTATATTATCTATAGTCTATACAGTATAGAGTTATATCCAATAACAGATCTATATTATCTATACAGTATAGAGTTATATCCAATAACAGATCTAcagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagata
>TU2386941
TACAGTAAAACATGTTGCCTATTGAAATGAAGGTGCCATCGTAACGTCTCGTTTGAAttcaaaacaataaaaacatttgTAAGCCTACAATCAATACACtcatggtgaagaaggtgcaagtGTTTGCAATAGATCAGTAAGGAACGTCCTGTAGCAGATAATACACATTGGctaaatcccaaatggcaccctattgtctTTAGCGAACTACAATAGGCAACAGTGGTCAATTTGGGACGTACACATTGATTCCCTTCTACCCTACAATACTTTTTGTTATAATACCAGACAAAAATGTAACCGTTATACGTATTTGAAAAGACAGAATGTCATGTCATCGATATCATAAAATGTCTCAATTAATGCTCTTAAAAAACAAAATTGATGACTTGTTAAAATGAtcaaaaatgacaaaaaaaactaTCATGATCTTCATTTACCTCACTCAGCAAATCAAACTACTGATGGATGGGTGAATGAAAGAATGGCTGAACAGATTCATGAATTCAAATGAATTAATTCATGCCAGAGAGATGATGGTCAAAGtctattggctgtgtgcttggtaTTGTGCACCTACAGAGAATCTCAAATTTAGTGACAAAATACTGGATTCAAATTGAATGGCTATTATTTAAAGTGAGGAAATACTGTATTTCAAATTGAATAGCTTTTATGTTAAGTGAGAAATATTCTATTTAAATTGAATTGCATATTATGCTTATGACAAATACTGTATTTCAAATTGAATGGCTATTAGGTTCAGTGAGGAAATACTGTATTTAAATTGCATGGATATTATGCTGTACAGTTAGGGCAGCTAAAAAGCACATGTATATGTAGTCAGAAAGAGGTCCACATCCTACACCCTAACAGGTATGCATACTGTCACAAATATCATGGGGAAAAGGGGTACATGCATCCTGAAAACGTTACAGTAAATCCTTCAAAAAAGGTGTTTGTGACCGTCGTAGACCAGGGTTAGAACCCAGGTGTCCTGCTGTCACGATACTGTGTTGtaagcccactgagctaaagtctATTAGGTTCACACACCAAGTCCTTCAAAAgtgtctttaaaaaaacaaacaaacaaacaaacacgtcATTCTGCTCCACTTCAATTTTCAGATTGAATAGACTTTTCCCTGCTTCtacttctgcattgcttgctgtttgggggttttaggctgggtttctgtacagcacgttgagatatcagctgatgtaagaagggcttgataaatacatttgatttgatccttatctagtgcactaccttttgaccagagccctgtaggtcttggtcaaaagtaggacactgaatagtgtgccatttgggacgtaaactGAGACAGTGAATAACAGTGAGAGTTCATCTGAGCCATACAGTATAGAGTTATATCCAATAACAGATATATATTATCTATACAGTATAGAGTTATATCCAATAACAGATCTATATTATCTATAGTCTATACAGTATAGAGTTATATCCAATAACAGATCTATATTATCTATACAGTATAGAGTTATATCCAATAACAGATCTATATTATCTATACAGTATAGAGTTATATCCAATAACAGATCTATATCATCTATACAGTATAGAGTTATATCCAATAACAGATCTATATCATCTATTATCTATACAGTATAGAGTTATATCCAATAACAGATCTATATTATCTATAGTCTATACAGTATATGGCTCTGAATGTATATGTTGCTATGTAGCGCTAGGCAGTTCTCTGGGGCAGGATGGGACAGCATTGGGGCAGTTCTCTGGGGCAGGATGGGACAGCATTGGGGCAGTTCTCTGGGGCAGGATGGGACAGCATTGGGGCAGTTCTCTGGGGCAGGATGGGACAGCATTGGGGCAGTTCTCTGGGGCAGGTTGAGGTTGGTGCAGCCTTGGGGCAGTTCTCTAGGGCAGGTTGGGACCGCCTTGGGGCAGTTCTCTAGGGCAGGTTGGGACAGCCTTGGGGCAGTTCTCTAGGGCAGGTTGGGACCGCCTTGGGGCAGTTCTCTAGGGCAGGTTGGGACAGCCTTGGGGCAGTTCTCTAGAGTAGGTTGGGACAGCCTTGGGGCAGTTCTCTAGGGCAGGTTAAGGCAGTGGTGGGGCTGTGATTGGGTCTGGGCTATGCTGGTGGTTGTGGTGTAGGCAGGGGTTGGGGCTGTGATTGGTTCTAGGGCTGTGCTGGTGCTGGTGGTGTAGGCAGGGGTTGGGGCTCTAAGCTCTCTGGCTTCAGTCCCAGGGGGAGGccgggagaggagagggggaggctggGGGAGGCCAGAGTGTTGAGGAGGGCTGAGACAGAGACGTCAGGAGACTGGAGCTTGGCTAGGAGCTGTAGCTGGTCCTGCTCATGACAGACCCCTGCCTCGTTGCAGACGCTGTGACACAGCCCTGTCAGACTCTGTAACATCTCCTCCATGTTCCTCTGCAGATGGGCCTGCTCCTCCAGcaacctcttcttct

Function

NR:

description
transcription regulator protein BACH1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2386943 False 1672 lncRNA 0.35 2 45468032 45490245
TU2386944 False 1630 lncRNA 0.36 2 45468032 45490245
TU2386941 True 2488 lncRNA 0.42 2 45487548 45490245

Neighbor

gene id symbol gene type direction distance location
rwdd2b rwdd2b coding downstream 25259 45435721 ~ 45442773 (-)
gbe1b gbe1 coding downstream 746390 44362319 ~ 44721642 (-)
LOC110507241 LOC106581541 coding downstream 1158016 44262965 ~ 44310016 (-)
LOC110508088 LOC106581525 coding downstream 1684757 43769240 ~ 43783275 (-)
LOC110508089 LOC106581526 coding downstream 1705156 43737070 ~ 43762876 (-)
stoml3a LOC104925222 coding upstream 183256 45673501 ~ 45686113 (-)
slc25a15a LOC106581545 coding upstream 197709 45687954 ~ 45701584 (-)
cog6 cog6 coding upstream 521948 46012193 ~ 46197229 (-)
LOC110515379 NA coding upstream 872417 46362662 ~ 46365128 (-)
lpar6a LOC106592078 coding upstream 1005307 46409330 ~ 46497886 (-)
G2087055 NA non-coding downstream 24612 45443141 ~ 45443420 (-)
G2087023 NA non-coding downstream 79003 45388781 ~ 45389029 (-)
G2087017 NA non-coding downstream 105632 45362197 ~ 45362400 (-)
G2087015 NA non-coding downstream 106310 45358513 ~ 45361722 (-)
G2086985 NA non-coding downstream 162913 45304724 ~ 45305119 (-)
G2087070 NA non-coding upstream 2535 45492780 ~ 45493014 (-)
G2087073 NA non-coding upstream 13880 45504125 ~ 45504549 (-)
G2087089 NA non-coding upstream 38460 45528705 ~ 45528940 (-)
G2087091 NA non-coding upstream 41341 45531586 ~ 45531834 (-)
G2087092 NA non-coding upstream 42534 45532779 ~ 45533016 (-)
G2086783 NA other downstream 546720 44920909 ~ 44921312 (-)
G2085726 NA other downstream 1555352 43912160 ~ 43912680 (-)
G2084740 LOC106613316 other downstream 2682997 42784627 ~ 42785035 (-)
LOC118944786 LOC106581464 other downstream 3787340 41573411 ~ 41680789 (-)
G2083443 NA other downstream 4043992 41423539 ~ 41424040 (-)
G2087090 LOC106593344 other upstream 40111 45530356 ~ 45530780 (-)
G2087288 NA other upstream 306825 45797070 ~ 45798330 (-)
ndufc2 nduc2 other upstream 1482336 46972581 ~ 46975116 (-)
G2088345 NA other upstream 1513620 47003865 ~ 47004875 (-)
G2088531 NA other upstream 1762430 47252675 ~ 47253186 (-)

Expression


Co-expression Network