G2087090 (LOC106593344)



Basic Information


Item Value
gene id G2087090
gene name LOC106593344
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 45530356 ~ 45530780 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2386975
GGCTGGTCTCCTGGGGGACCAGGGAGGGGTGGCGGGGCGGCTGGGGCTCCTGCTTGGGCTACCCCAAGGCTTCCTCCCATCCAGGCTAGAAGGACTGGAGCTGCGTTCAAACGAGCCCTGCTTCCTCAACGTTCTGTCGAAGGATGCCTCTTTCATCAACGTTCTATCTAAGAAAGGTTCTTTCTTCAAACTTCTATCAAATGAGGCCGACTTCTTTGTGGTGTTTTCAAACACGGTTGTTTTCTTTATGCTTTGTTCAAATGAAGTCGTTTTCTTCATGCTTTGTCCGAAGGAGCCTTGTTCCTTTGAAGTTTTATCAAAAGAGCCGAGCTTCTTCAAGCTTCTGGTTTCAACAGATTGAATCCCATTTGTGCCTAACTTGGCGGGTGAGTTGTGGTTCATATCAGGGGGAATAACCTTGTGGT

Function


NR:

description
PREDICTED: microtubule-associated tumor suppressor candidate 2-like, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2386975 True 425 TUCP 0.49 1 45530356 45530780

Neighbor


gene id symbol gene type direction distance location
rwdd2b rwdd2b coding downstream 87583 45435721 ~ 45442773 (-)
gbe1b gbe1 coding downstream 808714 44362319 ~ 44721642 (-)
LOC110507241 LOC106581541 coding downstream 1220340 44262965 ~ 44310016 (-)
LOC110508088 LOC106581525 coding downstream 1747081 43769240 ~ 43783275 (-)
LOC110508089 LOC106581526 coding downstream 1767480 43737070 ~ 43762876 (-)
stoml3a LOC104925222 coding upstream 142721 45673501 ~ 45686113 (-)
slc25a15a LOC106581545 coding upstream 157174 45687954 ~ 45701584 (-)
cog6 cog6 coding upstream 481413 46012193 ~ 46197229 (-)
LOC110515379 NA coding upstream 831882 46362662 ~ 46365128 (-)
lpar6a LOC106592078 coding upstream 964772 46409330 ~ 46497886 (-)
G2087089 NA non-coding downstream 1416 45528705 ~ 45528940 (-)
G2087073 NA non-coding downstream 25807 45504125 ~ 45504549 (-)
G2087070 NA non-coding downstream 37342 45492780 ~ 45493014 (-)
G2087063 NA non-coding downstream 40111 45468032 ~ 45490245 (-)
G2087068 NA non-coding downstream 51332 45477645 ~ 45479024 (-)
G2087091 NA non-coding upstream 806 45531586 ~ 45531834 (-)
G2087092 NA non-coding upstream 1999 45532779 ~ 45533016 (-)
G2087096 NA non-coding upstream 11246 45542026 ~ 45542267 (-)
G2087098 NA non-coding upstream 16777 45547557 ~ 45547919 (-)
G2087101 NA non-coding upstream 20435 45551215 ~ 45551567 (-)
G2086783 NA other downstream 609044 44920909 ~ 44921312 (-)
G2085726 NA other downstream 1617676 43912160 ~ 43912680 (-)
G2084740 LOC106613316 other downstream 2745321 42784627 ~ 42785035 (-)
LOC118944786 LOC106581464 other downstream 3849664 41573411 ~ 41680789 (-)
G2083443 NA other downstream 4106316 41423539 ~ 41424040 (-)
G2087288 NA other upstream 266290 45797070 ~ 45798330 (-)
ndufc2 nduc2 other upstream 1441801 46972581 ~ 46975116 (-)
G2088345 NA other upstream 1473085 47003865 ~ 47004875 (-)
G2088531 NA other upstream 1721895 47252675 ~ 47253186 (-)
G2088739 NA other upstream 2013523 47544303 ~ 47550500 (-)

Expression



Co-expression Network