G2088344


Basic Information

Item Value
gene id G2088344
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 47001702 ~ 47003692 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2388683
TTTTTAGTGGTCATGAACCGTCAAAATTGTGTTTTTCATAAAATGGTTTATTTCGTGCTCACAGGCACCCATCACTTCCATAGATGTTTAGTTGTAAAATAGTGAACGACTTCCTTTAAATGATCATTAAAATTACCATTTGCAAAAACGGATGAGTCAGAAACATGAGTCATGTTTAGTGATGATTATTTAATGTACCACAGGATAGCCTTAGGGATTATTTTGTACACATGAAAGAAAAGTCATATCCAAATTAAATGTAACATCCTGATGCTTCTCTGTTTCTCAACTGTATTCTATTGAAgtattgtactgtattctattgaagGTTTTTACTGTATTATATTGAAGGTTTTTACTGTATTCTATTGAAGGTTTTTTACTGTATTCTATTGAAGGTTTTTACTGTATTCTATTGAAgtattgtactgtattctattgaaggtttttactgtattctattgaagtattgtactgtattctattgaaGGTTTTTACTGTATTCTATTGAAGGTTTTTACTGTATTCTATTGAAGTATTGTACTGTGTATTTCTCCCTCTCGAGTCTCTAGACCATAGAAGAAAAGGTACGAGACATGAAACATGGATAAACACAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGTACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGTACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGTACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGTACTGTAGCAGTTTGACCAAGTTACTCAGTACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGTACTGTAGCAGTTTGACCAAGTTACTCAGTACTGTAGCAGTTTGACCAAGTTACTCAGTACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGTACTGTAGCAGTTTGACCAAGTTACTCAGTACTGTAGCAGTTTGACCAAGTTACTCAGTACTGTAGCAGTTTGACCAAGTTACTCAGTACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGTACTGTAGCAGTTTGACCAAGTTACTCAGTACTGTAGCAGT
>TU2388684
TTTTTAGTGGTCATGAACCGTCAAAATTGTGTTTTTCATAAAATGGTTTATTTCGTGCTCACAGGCACCCATCACTTCCATAGATGTTTAGTTGTAAAATAGTGAACGACTTCCTTTAAATGATCATTAAAATTACCATTTGCAAAAACGGATGAGTCAGAAACATGAGTCATGTTTAGTGATGATTATTTAATGTACCACAGGATAGCCTTAGGGATTATTTTGTACACATGAAAGAAAAGTCATATCCAAATTAAATGTAACATCCTGATGCTTCTCTGTTTCTCAACTGTATTCTATTGAAggtttactgtattctattgaaggtttttactgtattctattgaaggtttttactgtattctattgaaggtttttactgtattctattgaaggtttactgtattctattgaagGTTTTTACTGTATTCTATTGAAGGTTTTTTACTGTATTCTATTGAAGGTTTTTACTGTATTCTATTGAAGGTTTTTTACTGTATTCTATTGAAGGTTTTTTACTGTATTCTATTGTAGGTTTTTACTGTATTCTATTGAAGGTTTTTTACTGTATTCTATTGAAGGTTTTTACTATATTCTATTGAAGGTTTTTTACTGTATTCTATTGAAGGTTTTTACTGTATTCTATTGAAGTATTGTACTGTGTATTTCTCCCTCTCGAGTCTCTAGACCATAGAAGAAAAGGTACGAGACATGAAACATGGATAAACACAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGTACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGTACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGTACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGTACTGTAGCAGTTTGACCAAGTTACTCAGTACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGTACTGTAGCAGTTTGACCAAGTTACTCAGTACTGTAGCAGTTTGACCAAGTTACTCAGTACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGTACTGTAGCAGTTTGACCAAGTTACTCAGTACTGTAGCAGTTTGACCAAGTTACTCAGTACTGTAGCAGTTTGACCAAGTTACTCAGTACTGTAGCAGTTTGACCAAGTTACTCAGCACTGTAGCAGTTTGACCAAGTTACTCAGTACTGTAGCAGTTTGACCAAGTTACTCAGTACTGTAGCAGT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106574060

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2388683 False 1488 lncRNA 0.38 3 47001702 47003692
TU2388684 True 1603 lncRNA 0.37 4 47001702 47003692

Neighbor

gene id symbol gene type direction distance location
ndufc2 nduc2 coding downstream 26586 46972581 ~ 46975116 (-)
LOC118944689 NA coding downstream 231000 46768648 ~ 46770702 (-)
rcbtb2 rcbtb2 coding downstream 430029 46536201 ~ 46571673 (-)
lpar6a LOC106592078 coding downstream 503816 46409330 ~ 46497886 (-)
LOC110515379 NA coding downstream 636574 46362662 ~ 46365128 (-)
LOC118944730 NA coding upstream 22467 47026159 ~ 47026384 (-)
LOC110515838 NA coding upstream 604866 47608558 ~ 47609889 (-)
LOC118944731 NA coding upstream 1781102 48784794 ~ 48792946 (-)
yap1 yap1 coding upstream 1789465 48793157 ~ 48897016 (-)
cep126 NA coding upstream 1910759 48914451 ~ 49064609 (-)
G2088305 NA non-coding downstream 62540 46938887 ~ 46939162 (-)
G2088303 NA non-coding downstream 66460 46934976 ~ 46935242 (-)
G2088254 NA non-coding downstream 70361 46897874 ~ 46931341 (-)
G2088281 NA non-coding downstream 122933 46875624 ~ 46878769 (-)
G2088273 NA non-coding downstream 152809 46844319 ~ 46848893 (-)
G2088356 NA non-coding upstream 14849 47018541 ~ 47018944 (-)
G2088362 NA non-coding upstream 22771 47026463 ~ 47029739 (-)
G2088309 prcp non-coding upstream 28273 47031965 ~ 47037770 (-)
G2088369 NA non-coding upstream 54712 47058404 ~ 47058616 (-)
G2088372 NA non-coding upstream 60375 47064067 ~ 47064270 (-)
G2087288 NA other downstream 1203372 45797070 ~ 45798330 (-)
G2087090 LOC106593344 other downstream 1470922 45530356 ~ 45530780 (-)
G2086783 NA other downstream 2080390 44920909 ~ 44921312 (-)
G2085726 NA other downstream 3089022 43912160 ~ 43912680 (-)
G2088345 NA other upstream 173 47003865 ~ 47004875 (-)
G2088531 NA other upstream 248983 47252675 ~ 47253186 (-)
G2088739 NA other upstream 540611 47544303 ~ 47550500 (-)
G2089393 NA other upstream 789904 47793596 ~ 47794379 (-)
G2089738 LOC106591115 other upstream 1768657 48772349 ~ 48774632 (-)

Expression


Co-expression Network