G2088356



Basic Information


Item Value
gene id G2088356
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 47018541 ~ 47018944 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2388696
aaatgaaGCTATCATGTGAGAAGACTTCGTGCCATGATGCTAGTTAATCTATGGACAGACTGGACAAAGATTACAAAGTAACAGTTGGTATATGTTGGAAAGGTTCTCATCTATGGACAGACTGGACAAAGATCACAAAGTAACAGTTGGTATATGTTGGAAAGGTTCTCATCTATGGACAGACTGGGCAAAGATTACAAAGTAACAGTTGGTATATGTTGGAAAGGTTCTCATCTATGGACAGACTGGACAAAGATTACAAAGTAGCAGTTGGTATATGTTGGAAAGGTTCTCATCTATGGACAGACTGGGCAAAGATTACAAAGTAACAGTTGGTATATG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2388696 True 342 lncRNA 0.38 2 47018541 47018944

Neighbor


gene id symbol gene type direction distance location
ndufc2 nduc2 coding downstream 43425 46972581 ~ 46975116 (-)
LOC118944689 NA coding downstream 247839 46768648 ~ 46770702 (-)
rcbtb2 rcbtb2 coding downstream 446868 46536201 ~ 46571673 (-)
lpar6a LOC106592078 coding downstream 520655 46409330 ~ 46497886 (-)
LOC110515379 NA coding downstream 653413 46362662 ~ 46365128 (-)
LOC118944730 NA coding upstream 7215 47026159 ~ 47026384 (-)
LOC110515838 NA coding upstream 589614 47608558 ~ 47609889 (-)
LOC118944731 NA coding upstream 1765850 48784794 ~ 48792946 (-)
yap1 yap1 coding upstream 1774213 48793157 ~ 48897016 (-)
cep126 NA coding upstream 1895507 48914451 ~ 49064609 (-)
G2088307 NA non-coding downstream 1436 46971243 ~ 47017105 (-)
G2088344 NA non-coding downstream 14849 47001702 ~ 47003692 (-)
G2088305 NA non-coding downstream 79379 46938887 ~ 46939162 (-)
G2088303 NA non-coding downstream 83299 46934976 ~ 46935242 (-)
G2088254 NA non-coding downstream 87200 46897874 ~ 46931341 (-)
G2088362 NA non-coding upstream 7519 47026463 ~ 47029739 (-)
G2088309 prcp non-coding upstream 13021 47031965 ~ 47037770 (-)
G2088369 NA non-coding upstream 39460 47058404 ~ 47058616 (-)
G2088372 NA non-coding upstream 45123 47064067 ~ 47064270 (-)
G2088385 NA non-coding upstream 58810 47077754 ~ 47078272 (-)
G2088345 NA other downstream 13666 47003865 ~ 47004875 (-)
G2087288 NA other downstream 1220211 45797070 ~ 45798330 (-)
G2087090 LOC106593344 other downstream 1487761 45530356 ~ 45530780 (-)
G2086783 NA other downstream 2097229 44920909 ~ 44921312 (-)
G2088531 NA other upstream 233731 47252675 ~ 47253186 (-)
G2088739 NA other upstream 525359 47544303 ~ 47550500 (-)
G2089393 NA other upstream 774652 47793596 ~ 47794379 (-)
G2089738 LOC106591115 other upstream 1753405 48772349 ~ 48774632 (-)
G2090320 NA other upstream 2341016 49359960 ~ 49361515 (-)

Expression



Co-expression Network