G2088309 (prcp)


Basic Information

Item Value
gene id G2088309
gene name prcp
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 47031965 ~ 47037770 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2388641
atatatatatatatatatatatatatatatatatatatatatatatgtgtacctGTATTGGCCAGCGTGGGAGAGGTTGGAGGAAGTTAGCTTCGTAAGGATAGTCAACCATGGCCAGATTCACCCAGGTCTCTTGGAGCCAGGCCTTAAAACCGTCCAAGTCCGTCTTCTTGAGTGGGGAACATAAGCTAAACTCCCCGGACAGCCATTGGAGGCCGTCATCTGCACAGAGATGAGGAAAATAGTCCTCATGAGTTAACTAGGCTTTAAACTAGCTTTGAAAAAAGGCTATTTCATCCTACCAGTTGCTGTGACGTTGTCATTCAGACAGGCTAATTCATCCTACCAGTTGCTGTGACGTTGTCATTCAGACAGGCTAATTCATCCTACCAGTTGCTGTGACGTTGTCATTCAGACAGGCTAATTCATCCTACCAGTTGCTGTGATGTTGTCATTCAGACAGGCTAATTCATCCTACCAGTTGCTGAGATGTTGTCGATGGCCTTCCAGGACCTCCGGATGTTAACGTCACAGTTCAGTCCACTCCTGGCGAAGTCCTGGGTGACTATCTTATAGAAATCTCCACATGGAACCATGTCAGGGAACTGCCATATGGGGGCAGAGGCAGCCAGAGCTCTGgagtacacagagagacagatataacCCAGTAttaaccacacagagagacagatataacCAAGTAttaaccacacagagagacagttagaACACATTAACCACACAGAGACAGTTAGAACGCAGTCTGAGATTTTCCTCAggtcaaatagcaccctattccctataaagcacactacttttgaccacagccctatgagccctggtcaaaagtagttcactatataaaaatataaaaataggGCCCCATGAAGACCTGTACACAGTATCTCTTACCCAACAACAACATTAGGgtatttcattctcaaccaggcaGAGAGCATCCCTCCGTAGGACCCTCCGATGGCGATCACAGGACTTTCCTGAGCTCCAAGCACCTTCCTCTTCAGTTCTCTGATGAGCACAGCGAAGTCAGCTAGCGCCTGCTCCGACGTCAGGTAATTCAGGTGCTTGGTGTCCTGACTGTAAGAGTCTTGTCCAAACGGCAGGGATTCTCCATAGTAACGGTGCTCTGCAAACACCAACATGGCTCCCAGATCCTCTGCAACGTCCCACATGAAACCCTACAGACAAAAAGTACAAGGCAAAATATTCTAACAAATGATGCAAGGCATGCTGGGAAGATGAACACattacagaacagagaagatgaatacagaacagagaaaatgaatacagaacagagaagatgaatacagaacagagaagatgaacacattacagaacagaaaacagagaagatgaatacagaacagaacagagaagatgaacacagaacagagaagatgaacacattacagagaagatgaatacagaacagagaagatgaatacagaacagaacagagaagatgaatacagaacagagaagatgaacacagaacagagaagatgaatacagaacagagaagatgaatacagaacagagaagatgaatacagaacagagaagatgaatacagaacagagaagatgaacacattacagaacagagaagatgaatacatTACAGAAAAGATGAATATattacagaacagagaagatgaatacagaacagaagagagaagatgaatacattacagaacagagaacagagaagatgaatacattacagaacagagaagatgaatacagaacagagaagatgaatacattacagagaagatgaatacattacagaacagagaagatgaatacagaacagaacagagaggatgAATATattacagaacagagaacagagaagatgaatacattacagaacagagaagatgaatacagaacagagaagatgaatacattacagagaagatgaatacagaacagagaagatgaatacagaacagagaagatgaatacattacagagaagatgaatacattacagagaagatgaatacattacagaacagagaagatgaatacagaacagagaagatgaatacattacagagaagatgaatacattacagaacagagaagatgaatacagaacagagaagatgaatacagaacagagaagatgaatacagaacagaacagagaagatgaatacagaacagagaagatgaatacatTACAGAACAGAAAATATGAATACattacagaacagagaagatgaatacagaacagaacagagaagatgaatacattacagaacagagaacagagaagatgaatacagaacagaacagagaagatgaatacattacagaacagagaacagagaagatgaatacagaacagaacagagaagatgaatacattacagaacacagaacagagaagatgaatacagaacagaacagagaagatgaatacagaacagaacagagaagatgaatacagaacagaacagagaagatgaatacattacagaacagagaagatgaatacattacagaacagagaacagagaagatgaatacattacagaacagagaagatgaatacagaacagaacagagaagatgaatacattacagaacagagaagatgaatacattacagaacagagaagatgaatacagaacagaacagagaagatgaatacagaacagaacagagaagatgaatacattacagaacagagaagatgaatacagaacagagaagatgaatacagaacagagaagatgaatacagaacagaacagagaaggtgaatacagaacagaacagagaagatgaatacagaacagagaagatgaatacaaaacagaacagagaagatgaatacagaacagaacagagaagatgaatacagaacagagaagatgaatacagaacagaacagagaagatgaatacagaacagaacagagaagatgaatacagaacagagaagatgaatacagaacagagaagatgaatacattacagagaagatgaatacagaacagagaagatgaatacagaacagaagagagaagatgaacacagaacagagaagattaatacagaacagagaagatgaatacagaacagagaagatgaatacagaacagagaagatgaatacattacagaacagagaagatgaatacagaacagagaagatgaatacaaaacagagaagatgaatacattacagaacagagaagatgaatacagaacagaacagagaagatgaatacagaacagagaagatgaatacattacagaacagagaagatgaatacagaacagaacagagaagatgaatacagaacagagaagatgaatacaaaacagaacagagaagatgaatacagaacagagaagatgaatacagaacagaacagagaagatgaatacagaacagagaagatgaatacagaacagagaagatgaacacattacagaacagagaagatgaatacagaacagagaagatgaatacagaacagagaagatgaatacagaaGGGTAATTATTACAGTGTTATTGCAGAACCAGGTAATGTCTCCTTCATTGCCGGTGTAGAACAAGATAGGCCCTCCCTTCTGATCCCAGTGTTCATTATTAACCAGGTATCTCTGCTTAAAGGTGCCATCCTCCAGGAAACCAAAGTGATCGATCTGTAAGGACAGAGACGTACATCAGAAAAACATGAAGAAATCAAGAGGATGGCTAAAATATGACACGCTGCTACTTTAAACCCAACCtagtgtcacggatccctccgggaacgttcatcacgcacacctggcacctattgcgcagatgattacgggtctcgtcccgtgtgttactCATTGTGTGCTTGTGCTTATTCGAGGTGCACCTCACTCTTATGTtatgggtttctaccctgtgttttgttatgcgTTTGTTGGGTCTTCGTCCCAGTGCCTTTTTTGGGGGCGCAATAAAAAAatcctattacgcattcctgcgcctgtctcccgaataATTTATACCGACGTGACAGAATGATCGACCATTGAGGGAGACAGCGGGAATGGCCCGTCTCCACGACGACGCAACTTCGGCCGCTGCATCGGGTCCTGATCGACCCGCGCTGCGTTCCTGTGATCCTGGGGGTATTGTCACGGCTCCTTCCGGAactttcattacaca

Function

symbol description
prcp Predicted to enable dipeptidyl-peptidase activity. Predicted to be involved in several processes, including angiogenesis involved in wound healing; negative regulation of systemic arterial blood pressure; and regulation of blood vessel endothelial cell migration. Is expressed in blood cell; vascular endothelium; and vein. Orthologous to human PRCP (prolylcarboxypeptidase).

NR:

description
lysosomal Pro-X carboxypeptidase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2388641 True 4191 lncRNA 0.40 4 47031965 47037770

Neighbor

gene id symbol gene type direction distance location
LOC118944730 NA coding downstream 5581 47026159 ~ 47026384 (-)
ndufc2 nduc2 coding downstream 56849 46972581 ~ 46975116 (-)
LOC118944689 NA coding downstream 261263 46768648 ~ 46770702 (-)
rcbtb2 rcbtb2 coding downstream 460292 46536201 ~ 46571673 (-)
lpar6a LOC106592078 coding downstream 534079 46409330 ~ 46497886 (-)
LOC110515838 NA coding upstream 570788 47608558 ~ 47609889 (-)
LOC118944731 NA coding upstream 1747024 48784794 ~ 48792946 (-)
yap1 yap1 coding upstream 1755387 48793157 ~ 48897016 (-)
cep126 NA coding upstream 1876681 48914451 ~ 49064609 (-)
LOC110515989 arhgap42 coding upstream 2245245 49281401 ~ 49507522 (-)
G2088362 NA non-coding downstream 2226 47026463 ~ 47029739 (-)
G2088356 NA non-coding downstream 13021 47018541 ~ 47018944 (-)
G2088307 NA non-coding downstream 14860 46971243 ~ 47017105 (-)
G2088344 NA non-coding downstream 28273 47001702 ~ 47003692 (-)
G2088305 NA non-coding downstream 92803 46938887 ~ 46939162 (-)
G2088369 NA non-coding upstream 20634 47058404 ~ 47058616 (-)
G2088372 NA non-coding upstream 26297 47064067 ~ 47064270 (-)
G2088385 NA non-coding upstream 39984 47077754 ~ 47078272 (-)
G2088391 NA non-coding upstream 47488 47085258 ~ 47086367 (-)
G2088400 NA non-coding upstream 52993 47090763 ~ 47109741 (-)
G2088345 NA other downstream 27090 47003865 ~ 47004875 (-)
G2087288 NA other downstream 1233635 45797070 ~ 45798330 (-)
G2087090 LOC106593344 other downstream 1501185 45530356 ~ 45530780 (-)
G2086783 NA other downstream 2110653 44920909 ~ 44921312 (-)
G2088531 NA other upstream 214905 47252675 ~ 47253186 (-)
G2088739 NA other upstream 506533 47544303 ~ 47550500 (-)
G2089393 NA other upstream 755826 47793596 ~ 47794379 (-)
G2089738 LOC106591115 other upstream 1734579 48772349 ~ 48774632 (-)
G2090320 NA other upstream 2322190 49359960 ~ 49361515 (-)

Expression


Co-expression Network