LOC110508529 (LOC106569411)


Basic Information

Item Value
gene id LOC110508529
gene name LOC106569411
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 11037198 ~ 11063179 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036966781.1
GGAGCCAATAGCAGATCTCACTGAAAAACAGTTGTGAACGCTAAGCCTGCCTTATCAGtcagttgaatgagagagagtgaactGAACATTGAAGAGAGACGCACTAGGTGCACCAGTGACACAGACAGCCTTGTTGTAGAAgagcagaagaagagaaaaggaacCACTAGCTATGGGGCCCAGAGCTTGGTGCCTGTTTGTCCTGCTTGGGCTGTCCGTCTGGGGCAGCAGTGAGGGCCTCAGATCCCCCATCCTGACCCGGAGACGGAGGTACCTGGAGGACAAAGGAGAACCACCCAAAAAGTGCTCGTATACCTTCCTGGTCCCTGAGCAGAAGATCACAGGGCCAATCTGCACCAGCCGGGGCCTACACACGGACAAGGACCGCGTGACCCGCCTGGACGTAGCGGCGGTGAGGGACCTGCTTTCCAAACAGAGACGGGAGATGGATACCCTGAAGCTGGTGGTGAACATTGATGGGAACATGGTGAACGAGATGAAGTTGCTGAGGAAGGAGAGCAGGAACATGAACTCCAGGGTGACCCAGCTCTACATGCAGCTTCTGCACGAGATCATCAGGAAGAGAGACAACTCTCTGGAGCTGGCTCAGCTGGAGGGACGCATTCTGAACTCCACAGCAGAGTCCCTACGCCTGGCCGCCCGCTACCGTGACCTAGAGGTCCGATACGCTGCGCTCTCTGCCGTGGTCAACAGCCAGTCAGTTCTGGTTGGTGCCCTGGAAGAGCGCTGTCTGCAGGTGTATGGACGGCGGCAGGAGCAGTCTCCTCAGGGCCCACCACTGGTGCAGGTGGTGCCAGAGAACATACCGGTTAGCATCCCGAGATTTACCAACGAGATCCAGAGGGACCACGGCCGGGCATTTCCCAGAGACAGGGGCTCCCAAGCAGGGCCAGCACCCACAGGAAGCACCCTGGAGCTCCAGAAGGCTCCGCAGGGCAACTTCAGTGCAGAGGGTCCTTTCAGGGACTGTCTCCAGGCCCAGGAGGCTGGCCATAGCACCAGCGGTATGTACCTGCTGAAACCTGGCGAAGCGGAGAGGCCCATGCAGGTGTGGTGTGAGCAGGGCCTGGACAACGGAGGCTGGACAGTCATCCAGAGCAGGAGGGATGGCTCTGTCAACTTCTTCAGGAACTGGGACGCCTACAAGAATGGATTCGGCAACATAGATGGGGAGTACTGGCTGGGGCTGCTGGGGATCTACAAtttagggaagcagggagactACAGACTTCTAGTGGAGCTGGAGGACTGGGTGGGGAAGAAGGTGTATGCTGATTACAGCAGCTTCCACCTGGAGCATGAGAACGAGGGCTACCGCCTGAGGTTGGGCACCTACCAGGGAAACGCTGGCGACTCACTCAGCAGCCACAACGGCAAGCAGTTCACCACACTGGACAGAGACAAGGATGCCTTCTCAGGTAACTGTGCACACTTCCTTAAGGGAGGCTGGTGGTACAACTCCTGTGGCCAGGCCAATCTGAATGGTGTTTGGTACACTGGCGGTGTCTACCGCAGCAAGTTCCAGGACGGAATTTTCTGGGCAGACTACGGCGGAGGATTCTACTCTATGAAGGGAGTCCGCATGATGATTAGACCTATAGACTGagactacagagggagagacatgaCCATCCTATCCCTCAACCAACACATGTACACTATTGCCTATCTCAGACCTACTCACTCACAGAGATTGAGTACAAACATTGTCTGACCTCATTGTGGGATGGTAAAGTATTAGAGTATACTACTAATGTCTGGGCCTTACTGTCAGCACTAGACTTAGAGCCAAGGAGTGCCAGACCTTTCAGTTACCATGGAGAGCAAAACAACTGACCATATGGTATGGAATTGAAATCTGTGTACGTTGCTAGAGGTAAAAGCTTGCCTATTTTAGAGGCGTGTAAATATCTTTACATGGCATAATAACATCTTATGTAAGCATTCAATCTACTTTGTTTCAACTTCTCCATCTTGAGATGCTTTATCATTTGCATCCCTTGAGATGTTTTTTCGTGTATTTGAAATAAACCAGGGAGAAGCTGTAAGTGATCCTATAGAAAACATTGGGTTTTCGATTCACTGTCCATATTTGTGGATCATGCACCTTTTATTGTGCTCTCACAGCTGACTTATGTACTGTAGCCTGTGTgaatgtttttctcattttgcagTTGATTAAATCTCAATACGAGCCAGAGGCAaaacaagaagaaaaaaaaaaggaaaggAATTACGGTTTGTTTTGTGTGGTTTTCGGAGACTTAAAAAATGCACACGAAGCAGAGAGTTAGTATGAAGTATCGGAACAGACAACGAGAAACACATGGCTGAAAGCCACATGATAGAGtgaag
>XM_036966780.1
TCACCCCAGGCTAGCTCAATCTTTTTGGACCAGCCTCCATCCTACTGcgagtgtgtgtatgcatgcgtgtgtgtttgaatgccagagagagagagcgagacagagagaccagtaCTAGGCATAAGGCATGAGAGTCAAGAGCATGCAGTTATACAGGAGCCACAACGGAGACTGAGACATCGGCTCCGACAAGCCTGCAACAAAGACCAGCAGGAGAAACAAACGACGTTGGGACGCATAGACTGTCTTCACACAGCTGCAGGTGCACCAGTGACACAGACAGCCTTGTTGTAGAAgagcagaagaagagaaaaggaacCACTAGCTATGGGGCCCAGAGCTTGGTGCCTGTTTGTCCTGCTTGGGCTGTCCGTCTGGGGCAGCAGTGAGGGCCTCAGATCCCCCATCCTGACCCGGAGACGGAGGTACCTGGAGGACAAAGGAGAACCACCCAAAAAGTGCTCGTATACCTTCCTGGTCCCTGAGCAGAAGATCACAGGGCCAATCTGCACCAGCCGGGGCCTACACACGGACAAGGACCGCGTGACCCGCCTGGACGTAGCGGCGGTGAGGGACCTGCTTTCCAAACAGAGACGGGAGATGGATACCCTGAAGCTGGTGGTGAACATTGATGGGAACATGGTGAACGAGATGAAGTTGCTGAGGAAGGAGAGCAGGAACATGAACTCCAGGGTGACCCAGCTCTACATGCAGCTTCTGCACGAGATCATCAGGAAGAGAGACAACTCTCTGGAGCTGGCTCAGCTGGAGGGACGCATTCTGAACTCCACAGCAGAGTCCCTACGCCTGGCCGCCCGCTACCGTGACCTAGAGGTCCGATACGCTGCGCTCTCTGCCGTGGTCAACAGCCAGTCAGTTCTGGTTGGTGCCCTGGAAGAGCGCTGTCTGCAGGTGTATGGACGGCGGCAGGAGCAGTCTCCTCAGGGCCCACCACTGGTGCAGGTGGTGCCAGAGAACATACCGGTTAGCATCCCGAGATTTACCAACGAGATCCAGAGGGACCACGGCCGGGCATTTCCCAGAGACAGGGGCTCCCAAGCAGGGCCAGCACCCACAGGAAGCACCCTGGAGCTCCAGAAGGCTCCGCAGGGCAACTTCAGTGCAGAGGGTCCTTTCAGGGACTGTCTCCAGGCCCAGGAGGCTGGCCATAGCACCAGCGGTATGTACCTGCTGAAACCTGGCGAAGCGGAGAGGCCCATGCAGGTGTGGTGTGAGCAGGGCCTGGACAACGGAGGCTGGACAGTCATCCAGAGCAGGAGGGATGGCTCTGTCAACTTCTTCAGGAACTGGGACGCCTACAAGAATGGATTCGGCAACATAGATGGGGAGTACTGGCTGGGGCTGCTGGGGATCTACAAtttagggaagcagggagactACAGACTTCTAGTGGAGCTGGAGGACTGGGTGGGGAAGAAGGTGTATGCTGATTACAGCAGCTTCCACCTGGAGCATGAGAACGAGGGCTACCGCCTGAGGTTGGGCACCTACCAGGGAAACGCTGGCGACTCACTCAGCAGCCACAACGGCAAGCAGTTCACCACACTGGACAGAGACAAGGATGCCTTCTCAGGTAACTGTGCACACTTCCTTAAGGGAGGCTGGTGGTACAACTCCTGTGGCCAGGCCAATCTGAATGGTGTTTGGTACACTGGCGGTGTCTACCGCAGCAAGTTCCAGGACGGAATTTTCTGGGCAGACTACGGCGGAGGATTCTACTCTATGAAGGGAGTCCGCATGATGATTAGACCTATAGACTGagactacagagggagagacatgaCCATCCTATCCCTCAACCAACACATGTACACTATTGCCTATCTCAGACCTACTCACTCACAGAGATTGAGTACAAACATTGTCTGACCTCATTGTGGGATGGTAAAGTATTAGAGTATACTACTAATGTCTGGGCCTTACTGTCAGCACTAGACTTAGAGCCAAGGAGTGCCAGACCTTTCAGTTACCATGGAGAGCAAAACAACTGACCATATGGTATGGAATTGAAATCTGTGTACGTTGCTAGAGGTAAAAGCTTGCCTATTTTAGAGGCGTGTAAATATCTTTACATGGCATAATAACATCTTATGTAAGCATTCAATCTACTTTGTTTCAACTTCTCCATCTTGAGATGCTTTATCATTTGCATCCCTTGAGATGTTTTTTCGTGTATTTGAAATAAACCAGGGAGAAGCTGTAAGTGATCCTATAGAAAACATTGGGTTTTCGATTCACTGTCCATATTTGTGGATCATGCACCTTTTATTGTGCTCTCACAGCTGACTTATGTACTGTAGCCTGTGTgaatgtttttctcattttgcagTTGATTAAATCTCAATACGAGCCAGAGGCAaaacaagaagaaaaaaaaaaggaaaggAATTACGGTTTGTTTTGTGTGGTTTTCGGAGACTTAAAAAATGCACACGAAGCAGAGAGTTAGTATGAAGTATCGGAACAGACAACGAGAAACACATGGCTGAAAGCCACATGATAGAGtgaag

Function

NR:

description
angiopoietin-related protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036966781.1 False 2376 mRNA 0.51 5 11037198 11056427
XM_036966780.1 True 2531 mRNA 0.52 5 11037198 11063179

Neighbor

gene id symbol gene type direction distance location
LOC118944867 NA coding downstream 8771 11027041 ~ 11028427 (-)
LOC110508527 LOC106600407 coding downstream 43095 10991095 ~ 10994103 (-)
LOC110508524 NA coding downstream 51787 10972770 ~ 10985411 (-)
LOC110508523 LOC106600405 coding downstream 125686 10905527 ~ 10911512 (-)
LOC110508522 NA coding downstream 143057 10886198 ~ 10894141 (-)
LOC110508530 jun coding upstream 26337 11089516 ~ 11091825 (-)
LOC110508163 LOC106569415 coding upstream 80304 11143483 ~ 11145238 (-)
LOC110508539 NA coding upstream 396194 11459373 ~ 11464078 (-)
LOC110508543 LOC106600422 coding upstream 452375 11515554 ~ 11518446 (-)
LOC110508547 pter coding upstream 493412 11556591 ~ 11572467 (-)
G2105123 NA non-coding downstream 83214 10953753 ~ 10953984 (-)
G2103993 LOC106600392 non-coding downstream 202551 10832777 ~ 10834647 (-)
G2103897 LOC106600396 non-coding downstream 212842 10737947 ~ 10824356 (-)
G2103970 NA non-coding downstream 226657 10810038 ~ 10810541 (-)
G2103894 LOC106600393 non-coding downstream 279861 10720152 ~ 10757337 (-)
G2105190 NA non-coding upstream 10011 11073190 ~ 11073427 (-)
G2105194 tada1 non-coding upstream 15515 11078694 ~ 11078982 (-)
G2105195 NA non-coding upstream 16023 11079202 ~ 11079927 (-)
G2105197 NA non-coding upstream 17555 11080734 ~ 11081223 (-)
G2105144 NA non-coding upstream 21075 11084254 ~ 11084790 (-)
G2103920 NA other downstream 328699 10708012 ~ 10708499 (-)
G2103257 NA other downstream 830522 10206063 ~ 10206676 (-)
G2103203 LOC106600278 other downstream 921801 10113428 ~ 10115397 (-)
LOC110508476 LOC106600265 other downstream 1029295 10004226 ~ 10007929 (-)
G2105419 LOC104953893 other upstream 435947 11499126 ~ 11500072 (-)
G2109663 LOC106599735 other upstream 4476589 15539768 ~ 15554897 (-)
G2109705 NA other upstream 4540506 15603685 ~ 15604463 (-)
LOC110508627 LOC106599725 other upstream 4640157 15703333 ~ 15793545 (-)
G2110939 NA other upstream 5736211 16799390 ~ 16799869 (-)

Expression


Co-expression Network