Gene
RNA
| Item | Value |
|---|---|
| gene id | G2103870 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 10644219 ~ 10644552 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| cathepsin L1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2406386 | True | 334 | lncRNA | 0.54 | 1 | 10644219 | 10644552 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508501 | LOC106600384 | coding | downstream | 103874 | 10535026 ~ 10540345 (-) |
| LOC110508159 | LOC106600382 | coding | downstream | 135870 | 10504714 ~ 10508349 (-) |
| LOC110508497 | LOC106600370 | coding | downstream | 180389 | 10418527 ~ 10463830 (-) |
| LOC110508496 | LOC106600349 | coding | downstream | 229579 | 10387353 ~ 10414640 (-) |
| LOC110508492 | LOC106600326 | coding | downstream | 321135 | 10306711 ~ 10323084 (-) |
| LOC110508509 | LOC106600390 | coding | upstream | 33250 | 10677802 ~ 10681747 (-) |
| LOC110508508 | LOC106600390 | coding | upstream | 44631 | 10689183 ~ 10692245 (-) |
| LOC110508519 | LOC106600402 | coding | upstream | 200663 | 10845215 ~ 10852874 (-) |
| LOC110508520 | LOC106600403 | coding | upstream | 224564 | 10869116 ~ 10884590 (-) |
| LOC110508522 | NA | coding | upstream | 242075 | 10886198 ~ 10894141 (-) |
| G2103869 | NA | non-coding | downstream | 2104 | 10641904 ~ 10642115 (-) |
| G2103867 | NA | non-coding | downstream | 5816 | 10638175 ~ 10638403 (-) |
| G2103860 | NA | non-coding | downstream | 14654 | 10629359 ~ 10629565 (-) |
| G2103857 | NA | non-coding | downstream | 20448 | 10623551 ~ 10623771 (-) |
| G2103853 | NA | non-coding | downstream | 23986 | 10619979 ~ 10620233 (-) |
| G2103871 | NA | non-coding | upstream | 390 | 10644942 ~ 10645221 (-) |
| G2103872 | NA | non-coding | upstream | 1131 | 10645683 ~ 10646115 (-) |
| G2103876 | NA | non-coding | upstream | 5130 | 10649682 ~ 10650003 (-) |
| G2103917 | NA | non-coding | upstream | 60901 | 10705453 ~ 10705659 (-) |
| G2103918 | NA | non-coding | upstream | 61174 | 10705726 ~ 10705929 (-) |
| G2103257 | NA | other | downstream | 437543 | 10206063 ~ 10206676 (-) |
| G2103203 | LOC106600278 | other | downstream | 528822 | 10113428 ~ 10115397 (-) |
| LOC110508476 | LOC106600265 | other | downstream | 636316 | 10004226 ~ 10007929 (-) |
| LOC110508473 | LOC106600236 | other | downstream | 832361 | 9739138 ~ 9883971 (-) |
| G2103015 | NA | other | downstream | 867311 | 9776619 ~ 9776908 (-) |
| G2103920 | NA | other | upstream | 63460 | 10708012 ~ 10708499 (-) |
| G2105419 | LOC104953893 | other | upstream | 854574 | 11499126 ~ 11500072 (-) |
| G2109663 | LOC106599735 | other | upstream | 4895216 | 15539768 ~ 15554897 (-) |
| G2109705 | NA | other | upstream | 4959133 | 15603685 ~ 15604463 (-) |
