LOC118945457


Basic Information

Item Value
gene id LOC118945457
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 2350099 ~ 2350217 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005040603.1
gcttacggccacaccggcctgagtacgcctgatctcgtccgatctcggaagctaagcagggtcgggcctggttagtacttggatgggagaccgcctgggaataccaggtgctgtaagct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005040603.1 True 119 mRNA 0.60 1 2350099 2350217

Neighbor

gene id symbol gene type direction distance location
LOC118945449 NA coding upstream 178 2349803 ~ 2349921 (+)
LOC118945438 NA coding upstream 474 2349507 ~ 2349625 (+)
LOC118945427 NA coding upstream 770 2349211 ~ 2349329 (+)
LOC118945377 NA coding upstream 1066 2348915 ~ 2349033 (+)
LOC118945440 NA coding upstream 1362 2348619 ~ 2348737 (+)
LOC118945463 NA coding downstream 178 2350395 ~ 2350513 (+)
LOC118945387 NA coding downstream 474 2350691 ~ 2350809 (+)
trnas-cga-51 NA coding downstream 134055 2484272 ~ 2484353 (+)
LOC110509518 LOC106578716 coding downstream 306424 2656641 ~ 2659376 (+)
LOC110509521 LOC100195713 coding downstream 737822 3088039 ~ 3142362 (+)
G2140902 NA non-coding upstream 51996 2275766 ~ 2298103 (+)
G2140890 NA non-coding upstream 133385 2216513 ~ 2216714 (+)
G2140807 NA non-coding upstream 284283 2065423 ~ 2065816 (+)
G2140714 NA non-coding upstream 334197 1917305 ~ 2015902 (+)
G2140709 NA non-coding upstream 451136 1898673 ~ 1898963 (+)
G2140921 NA non-coding downstream 26120 2376337 ~ 2511786 (+)
G2140946 NA non-coding downstream 63454 2413671 ~ 2414792 (+)
G2140949 NA non-coding downstream 77300 2427517 ~ 2453273 (+)
G2140990 NA non-coding downstream 180303 2530520 ~ 2530802 (+)
G2141017 NA non-coding downstream 223757 2573974 ~ 2574904 (+)
LOC110509554 LOC105007341 other upstream 409108 1935597 ~ 1941376 (+)
LOC110509295 LOC106562719 other upstream 771540 1572502 ~ 1618684 (+)
LOC110509506 LOC106562870 other upstream 920365 1271496 ~ 1429741 (+)
G2139520 LOC106562868 other upstream 1496312 852249 ~ 853787 (+)
LOC110509291 LOC106562839 other upstream 1759295 536258 ~ 614583 (+)
G2142277 NA other downstream 733000 3083217 ~ 3083571 (+)
G2142386 LOC106562824 other downstream 968732 3318949 ~ 3324094 (+)
G2144385 NA other downstream 2677534 5027751 ~ 5028239 (+)
G2144416 NA other downstream 2684972 5035189 ~ 5035913 (+)
G2144756 NA other downstream 2933644 5283861 ~ 5284603 (+)

Expression


Co-expression Network