G2139464


Basic Information

Item Value
gene id G2139464
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 846076 ~ 846659 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2447050
CTCACACTTGTCCCCTCATATCAATGGGTCTCAATGGGActtacctgcttaaataaaggttaaataatataaATACTCACACTTGTCCCCTCATATCAATGGGTCTCAATGGGActtacctgcttaaataaaggttaaataatataaATACTCACACTTGTCCCCTCATATCAATGGGTCTCAATGGGActtacctgcttaaataaaggttaaataatataaATACTCACACTTGTCCCCTCATATCAATGGGTCTCAATGGGActtacctgcttaaataaaggttaaataatataaATACTCACACTTGCTGGAAGCGCCTCATACTGTCCAGGATGTTGAACTGCTGCCAGCGCTTGGAGAAGTTGACCTTCCCGTCGATGAGGTCCGGGTTCCCCAGGTGGACGAAGGTCAGGTCCTGCAGGATCAAACCA

Function

NR:

description
rap guanine nucleotide exchange factor 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2447050 True 434 lncRNA 0.42 2 846076 846659

Neighbor

gene id symbol gene type direction distance location
LOC110509503 LOC106562869 coding upstream 2063 835828 ~ 844013 (+)
LOC110509499 LOC106562841 coding upstream 142250 694527 ~ 703826 (+)
LOC110509498 LOC106562841 coding upstream 151728 691741 ~ 694348 (+)
LOC110509496 LOC106562840 coding upstream 195950 632021 ~ 650126 (+)
LOC100305272 dpm2 coding upstream 217079 619789 ~ 629216 (+)
LOC110509506 LOC106562870 coding downstream 424837 1271496 ~ 1429741 (+)
LOC110509509 LOC106562874 coding downstream 672757 1519416 ~ 1532574 (+)
LOC110509512 LOC106562877 coding downstream 707966 1554625 ~ 1558840 (+)
LOC110509295 LOC106562719 coding downstream 725843 1572502 ~ 1618684 (+)
LOC110509513 LOC106562718 coding downstream 807933 1654592 ~ 1662205 (+)
G2139515 NA non-coding upstream 11909 833822 ~ 834167 (+)
G2139512 NA non-coding upstream 19054 826787 ~ 827022 (+)
G2139439 NA non-coding upstream 121683 724038 ~ 724393 (+)
G2139438 NA non-coding upstream 122202 723083 ~ 723874 (+)
G2139437 NA non-coding upstream 125149 720611 ~ 720927 (+)
G2139528 NA non-coding downstream 12870 859529 ~ 859842 (+)
G2140158 NA non-coding downstream 120639 967298 ~ 968022 (+)
G2140165 NA non-coding downstream 124913 971572 ~ 972394 (+)
G2140166 NA non-coding downstream 125857 972516 ~ 972774 (+)
G2140185 NA non-coding downstream 149943 996602 ~ 996829 (+)
LOC110509291 LOC106562839 other upstream 255272 536258 ~ 614583 (+)
G2139202 NA other upstream 521028 324366 ~ 325048 (+)
G2139145 NA other upstream 687243 158015 ~ 158833 (+)
LOC110509486 LOC106562830 other upstream 696823 131779 ~ 149258 (+)
G2139520 LOC106562868 other downstream 5590 852249 ~ 853787 (+)
LOC110509554 LOC105007341 other downstream 1091725 1935597 ~ 1941376 (+)
G2142277 NA other downstream 2236558 3083217 ~ 3083571 (+)

Expression


Co-expression Network