G2140158


Basic Information

Item Value
gene id G2140158
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 967298 ~ 968022 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2447822
attctaaagaatgtacttttggtttacatataTTTATGGtttttgttgtatgctactgtatacaacagtaatgtttggcctaataaatattttctctttctacattgcattgtgtttacagtgtacttattacccctctcagcagatgactttcactgtagaacattgtattggtgtttacagtgtacttgttacccctctcagcagattactttcactgtagaacattgtattggtgtttacagtgtacttgttacccctctcagcagattactttcactgtagaacattgtattggtgtttacagtgtacttattagccctctcagcagattactttcactgtagaacattgtattggtgtttacagtgtacttgttacccctctcagcagattactttcactgtagaacattgtattgaaatgtagatataagcctatgaaagaccaaagagctttagatttagaacaacagtgtttacatggtatatccagaaatgtactattatgaaagcagtgtttgccatttgatgcaaatgcttcattctgacatgtgttcatggcattttgaatgcagtggtacattttgaaggagatgtgaggcattttgcattttgtgtgtgcagttttgggaattgtgtgtagagttcTGAAaaatttagacatttttgaaaactTGTGTTTGGAAAAAAGTAATGATTGTTCATGTTACGATagactaggag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2447822 True 725 lncRNA 0.35 1 967298 968022

Neighbor

gene id symbol gene type direction distance location
LOC110509503 LOC106562869 coding upstream 123285 835828 ~ 844013 (+)
LOC110509499 LOC106562841 coding upstream 263472 694527 ~ 703826 (+)
LOC110509498 LOC106562841 coding upstream 272950 691741 ~ 694348 (+)
LOC110509496 LOC106562840 coding upstream 317172 632021 ~ 650126 (+)
LOC100305272 dpm2 coding upstream 338301 619789 ~ 629216 (+)
LOC110509506 LOC106562870 coding downstream 303474 1271496 ~ 1429741 (+)
LOC110509509 LOC106562874 coding downstream 551394 1519416 ~ 1532574 (+)
LOC110509512 LOC106562877 coding downstream 586603 1554625 ~ 1558840 (+)
LOC110509295 LOC106562719 coding downstream 604480 1572502 ~ 1618684 (+)
LOC110509513 LOC106562718 coding downstream 686570 1654592 ~ 1662205 (+)
G2139528 NA non-coding upstream 107456 859529 ~ 859842 (+)
G2139464 NA non-coding upstream 120639 846076 ~ 846659 (+)
G2139515 NA non-coding upstream 133131 833822 ~ 834167 (+)
G2139512 NA non-coding upstream 140276 826787 ~ 827022 (+)
G2139439 NA non-coding upstream 242905 724038 ~ 724393 (+)
G2140165 NA non-coding downstream 3550 971572 ~ 972394 (+)
G2140166 NA non-coding downstream 4494 972516 ~ 972774 (+)
G2140185 NA non-coding downstream 28580 996602 ~ 996829 (+)
G2140190 NA non-coding downstream 36946 1004968 ~ 1057478 (+)
G2140191 NA non-coding downstream 47094 1015116 ~ 1033840 (+)
G2139520 LOC106562868 other upstream 113511 852249 ~ 853787 (+)
LOC110509291 LOC106562839 other upstream 376494 536258 ~ 614583 (+)
G2139202 NA other upstream 642250 324366 ~ 325048 (+)
G2139145 NA other upstream 808465 158015 ~ 158833 (+)
LOC110509486 LOC106562830 other upstream 818045 131779 ~ 149258 (+)
LOC110509554 LOC105007341 other downstream 970362 1935597 ~ 1941376 (+)
G2142277 NA other downstream 2115195 3083217 ~ 3083571 (+)
G2142386 LOC106562824 other downstream 2350927 3318949 ~ 3324094 (+)

Expression


Co-expression Network