G2140215


Basic Information

Item Value
gene id G2140215
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 1084173 ~ 1084408 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2447893
gtatagactgaatggttagagctagaaactactgtgacccctctatggaaagctgagactctcacgaaaacgtacatgtaatcgatttcgctctataccattcacaggccacacactagtagttagaaggtgacgtgtttgtgggatgtcccaggacattgtcacaaatgccaaactcaagacagttgtcgatgactagttggttactcgtttcccatttaacaacttaagccttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2447893 True 236 lncRNA 0.43 1 1084173 1084408

Neighbor

gene id symbol gene type direction distance location
LOC110509503 LOC106562869 coding upstream 240160 835828 ~ 844013 (+)
LOC110509499 LOC106562841 coding upstream 380347 694527 ~ 703826 (+)
LOC110509498 LOC106562841 coding upstream 389825 691741 ~ 694348 (+)
LOC110509496 LOC106562840 coding upstream 434047 632021 ~ 650126 (+)
LOC100305272 dpm2 coding upstream 455176 619789 ~ 629216 (+)
LOC110509506 LOC106562870 coding downstream 187088 1271496 ~ 1429741 (+)
LOC110509509 LOC106562874 coding downstream 435008 1519416 ~ 1532574 (+)
LOC110509512 LOC106562877 coding downstream 470217 1554625 ~ 1558840 (+)
LOC110509295 LOC106562719 coding downstream 488094 1572502 ~ 1618684 (+)
LOC110509513 LOC106562718 coding downstream 570184 1654592 ~ 1662205 (+)
G2140214 NA non-coding upstream 779 1083024 ~ 1083394 (+)
G2140212 NA non-coding upstream 7920 1075517 ~ 1076253 (+)
G2140208 NA non-coding upstream 12367 1071554 ~ 1071806 (+)
G2140207 NA non-coding upstream 14273 1069455 ~ 1069900 (+)
G2140190 NA non-coding upstream 26695 1004968 ~ 1057478 (+)
G2140226 NA non-coding downstream 19933 1104341 ~ 1105020 (+)
G2140229 NA non-coding downstream 26270 1110678 ~ 1111439 (+)
G2140234 NA non-coding downstream 28953 1113361 ~ 1113656 (+)
G2140235 NA non-coding downstream 29607 1114015 ~ 1115585 (+)
G2140237 NA non-coding downstream 31712 1116120 ~ 1116439 (+)
G2139520 LOC106562868 other upstream 230386 852249 ~ 853787 (+)
LOC110509291 LOC106562839 other upstream 493369 536258 ~ 614583 (+)
G2139202 NA other upstream 759125 324366 ~ 325048 (+)
G2139145 NA other upstream 925340 158015 ~ 158833 (+)
LOC110509486 LOC106562830 other upstream 934920 131779 ~ 149258 (+)
LOC110509554 LOC105007341 other downstream 853976 1935597 ~ 1941376 (+)
G2142277 NA other downstream 1998809 3083217 ~ 3083571 (+)
G2142386 LOC106562824 other downstream 2234541 3318949 ~ 3324094 (+)

Expression


Co-expression Network