G2140524


Basic Information

Item Value
gene id G2140524
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 1482520 ~ 1482731 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2448220
acattacacatTATGATCCCGCACTTGGCGGGGATCGCCTTGACAAAATCGTCAAAAACTTCCACCTCTTTGACCCTGTTCCAGGAAAGCCAAACGACACTGAGATATTCTTAGCAGACATAGAGGACGCCTTGGATGGCTACCCAAATGCTACGAATGCAGACAGGCTCTACCTTTTGAAGCGAACGTCCAACAGACACGTGACATGGTTC

Function

NR:

description
uncharacterized protein LOC111188456

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2448220 True 212 lncRNA 0.48 1 1482520 1482731

Neighbor

gene id symbol gene type direction distance location
LOC110509506 LOC106562870 coding upstream 52779 1271496 ~ 1429741 (+)
LOC110509503 LOC106562869 coding upstream 638507 835828 ~ 844013 (+)
LOC110509499 LOC106562841 coding upstream 778694 694527 ~ 703826 (+)
LOC110509498 LOC106562841 coding upstream 788172 691741 ~ 694348 (+)
LOC110509496 LOC106562840 coding upstream 832394 632021 ~ 650126 (+)
LOC110509509 LOC106562874 coding downstream 36685 1519416 ~ 1532574 (+)
LOC110509512 LOC106562877 coding downstream 71894 1554625 ~ 1558840 (+)
LOC110509295 LOC106562719 coding downstream 89771 1572502 ~ 1618684 (+)
LOC110509513 LOC106562718 coding downstream 171861 1654592 ~ 1662205 (+)
LOC110509514 LOC106562918 coding downstream 238260 1720991 ~ 1760307 (+)
G2140523 NA non-coding upstream 1085 1481187 ~ 1481435 (+)
G2140520 NA non-coding upstream 3381 1478918 ~ 1479139 (+)
G2140511 NA non-coding upstream 24111 1458199 ~ 1458409 (+)
G2140369 NA non-coding upstream 260692 1221429 ~ 1221828 (+)
G2140263 NA non-coding upstream 270651 1144562 ~ 1211869 (+)
G2140526 NA non-coding downstream 3005 1485736 ~ 1486010 (+)
G2140527 NA non-coding downstream 3392 1486123 ~ 1486497 (+)
G2140528 NA non-coding downstream 4328 1487059 ~ 1487307 (+)
G2140533 NA non-coding downstream 8306 1491037 ~ 1491261 (+)
G2140558 NA non-coding downstream 52261 1534992 ~ 1535337 (+)
G2139520 LOC106562868 other upstream 628733 852249 ~ 853787 (+)
LOC110509291 LOC106562839 other upstream 891716 536258 ~ 614583 (+)
G2139202 NA other upstream 1157472 324366 ~ 325048 (+)
G2139145 NA other upstream 1323687 158015 ~ 158833 (+)
LOC110509554 LOC105007341 other downstream 455653 1935597 ~ 1941376 (+)
G2142277 NA other downstream 1600486 3083217 ~ 3083571 (+)
G2142386 LOC106562824 other downstream 1836218 3318949 ~ 3324094 (+)
G2144385 NA other downstream 3545020 5027751 ~ 5028239 (+)

Expression


Co-expression Network