G2140527


Basic Information

Item Value
gene id G2140527
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 1486123 ~ 1486497 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2448223
tctcaaccgcAACTGaagaggagagatctaggggtctgaagatgtgggggttttatgacccctcacacccctggtaaatcttaggccacagacaaattccttttgtcctgttactatggagaaccagcctcagaacattaaacatgaaataaagggactttggaacaatggtttccgtcagatATGCAGTCGATGCAGTCTTTCCATGAGTTCAGTACATTGAGCAATGTCATCATGAGATGCAATTTGTTTCTAAGAAAAATCAAGCttgtggtcatgacgatagatggaatatgaaaatgtatgtcatttttgttttgttattaaaggttaatagatgacgttattacgaaaacattgtaacgtcaACAGTtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2448223 True 375 lncRNA 0.39 1 1486123 1486497

Neighbor

gene id symbol gene type direction distance location
LOC110509506 LOC106562870 coding upstream 56382 1271496 ~ 1429741 (+)
LOC110509503 LOC106562869 coding upstream 642110 835828 ~ 844013 (+)
LOC110509499 LOC106562841 coding upstream 782297 694527 ~ 703826 (+)
LOC110509498 LOC106562841 coding upstream 791775 691741 ~ 694348 (+)
LOC110509496 LOC106562840 coding upstream 835997 632021 ~ 650126 (+)
LOC110509509 LOC106562874 coding downstream 32919 1519416 ~ 1532574 (+)
LOC110509512 LOC106562877 coding downstream 68128 1554625 ~ 1558840 (+)
LOC110509295 LOC106562719 coding downstream 86005 1572502 ~ 1618684 (+)
LOC110509513 LOC106562718 coding downstream 168095 1654592 ~ 1662205 (+)
LOC110509514 LOC106562918 coding downstream 234494 1720991 ~ 1760307 (+)
G2140526 NA non-coding upstream 113 1485736 ~ 1486010 (+)
G2140524 NA non-coding upstream 3392 1482520 ~ 1482731 (+)
G2140523 NA non-coding upstream 4688 1481187 ~ 1481435 (+)
G2140520 NA non-coding upstream 6984 1478918 ~ 1479139 (+)
G2140511 NA non-coding upstream 27714 1458199 ~ 1458409 (+)
G2140528 NA non-coding downstream 562 1487059 ~ 1487307 (+)
G2140533 NA non-coding downstream 4540 1491037 ~ 1491261 (+)
G2140558 NA non-coding downstream 48495 1534992 ~ 1535337 (+)
G2140563 NA non-coding downstream 55644 1542141 ~ 1542429 (+)
G2140564 NA non-coding downstream 56398 1542895 ~ 1543126 (+)
G2139520 LOC106562868 other upstream 632336 852249 ~ 853787 (+)
LOC110509291 LOC106562839 other upstream 895319 536258 ~ 614583 (+)
G2139202 NA other upstream 1161075 324366 ~ 325048 (+)
G2139145 NA other upstream 1327290 158015 ~ 158833 (+)
LOC110509554 LOC105007341 other downstream 451887 1935597 ~ 1941376 (+)
G2142277 NA other downstream 1596720 3083217 ~ 3083571 (+)
G2142386 LOC106562824 other downstream 1832452 3318949 ~ 3324094 (+)
G2144385 NA other downstream 3541254 5027751 ~ 5028239 (+)

Expression


Co-expression Network