G2140692



Basic Information


Item Value
gene id G2140692
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 1864042 ~ 1864303 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2448414
cctcttggacctagacttggcgctctggtaccgcttgccgtgcggtagctgagagaacagtctttgactagggtggctggagtctttgaccatttttatggccttcctctgacaccgcctggtatagaggtcctggatggcaggaagcttggactGTAAAaccatttgaggatctgaggacccatgccaaatctttctcagtctcctgagggggaataggttttgctgTGCCCTCACACAACTgtattggtgtgcttggacc

Function


NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU2448414 True 262 lncRNA 0.52 1 1864042 1864303

Neighbor


gene id symbol gene type direction distance location
LOC110509558 cnnm3 coding upstream 11194 1826511 ~ 1852848 (+)
LOC110509516 LOC106569151 coding upstream 42452 1783138 ~ 1821590 (+)
LOC110509515 LOC106563008 coding upstream 88301 1761263 ~ 1775741 (+)
LOC110509514 LOC106562918 coding upstream 103735 1720991 ~ 1760307 (+)
LOC110509513 LOC106562718 coding upstream 201837 1654592 ~ 1662205 (+)
LOC110509557 LOC106562915 coding downstream 8710 1873013 ~ 1876963 (+)
LOC110509554 LOC105007341 coding downstream 71294 1935597 ~ 1941376 (+)
LOC110509553 LOC106562910 coding downstream 101017 1965320 ~ 2022282 (+)
LOC110509305 NA coding downstream 182874 2047177 ~ 2057296 (+)
LOC110509551 LOC106562908 coding downstream 194243 2058546 ~ 2121341 (+)
G2140667 NA non-coding upstream 37721 1822846 ~ 1826321 (+)
G2140609 NA non-coding upstream 211199 1652607 ~ 1652843 (+)
G2140605 NA non-coding upstream 223604 1640206 ~ 1640438 (+)
G2140581 NA non-coding upstream 224774 1637304 ~ 1639268 (+)
G2140580 NA non-coding upstream 228217 1621003 ~ 1635825 (+)
G2140693 NA non-coding downstream 87 1864390 ~ 1864645 (+)
G2140698 NA non-coding downstream 3085 1867388 ~ 1867612 (+)
G2140699 NA non-coding downstream 3414 1867717 ~ 1867950 (+)
G2140701 NA non-coding downstream 13681 1877984 ~ 1878242 (+)
G2140707 NA non-coding downstream 31217 1895520 ~ 1895749 (+)
LOC110509295 LOC106562719 other upstream 285483 1572502 ~ 1618684 (+)
LOC110509506 LOC106562870 other upstream 434308 1271496 ~ 1429741 (+)
G2139520 LOC106562868 other upstream 1010255 852249 ~ 853787 (+)
LOC110509291 LOC106562839 other upstream 1273238 536258 ~ 614583 (+)
G2139202 NA other upstream 1538994 324366 ~ 325048 (+)
G2142277 NA other downstream 1218914 3083217 ~ 3083571 (+)
G2142386 LOC106562824 other downstream 1454646 3318949 ~ 3324094 (+)
G2144385 NA other downstream 3163448 5027751 ~ 5028239 (+)
G2144416 NA other downstream 3170886 5035189 ~ 5035913 (+)

Expression



Co-expression Network