G2142214


Basic Information

Item Value
gene id G2142214
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 3004884 ~ 3005177 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2450103
gttctcaatcagggacagctgtctatcgttgtctctgattgagaaccatacttcggtagctcttgcccacatgggttttgtgggtagttgctttctgttttgtgttttgcacctgacggagctgtttcagttgttatttttgttactttgtatttagtgttcagttctatttaataaatgacgaacacgtaccacgctgcgctttggtcctcaccttcttccaccaacggccgttacaatctgtgaccaacagatgtatatctgtattctcagttatgtgaaatccatagattc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2450103 True 294 lncRNA 0.42 1 3004884 3005177

Neighbor

gene id symbol gene type direction distance location
LOC110509518 LOC106578716 coding upstream 345508 2656641 ~ 2659376 (+)
trnas-cga-51 NA coding upstream 520531 2484272 ~ 2484353 (+)
LOC118945387 NA coding upstream 654075 2350691 ~ 2350809 (+)
LOC118945463 NA coding upstream 654371 2350395 ~ 2350513 (+)
LOC118945457 NA coding upstream 654667 2350099 ~ 2350217 (+)
LOC110509521 LOC100195713 coding downstream 82862 3088039 ~ 3142362 (+)
LOC110509522 gstt2b coding downstream 160134 3165311 ~ 3170636 (+)
LOC110509523 ppp6c coding downstream 231633 3236810 ~ 3261067 (+)
LOC118945358 LOC106570398 coding downstream 269231 3274408 ~ 3287599 (+)
LOC110509524 LOC106562843 coding downstream 287013 3292190 ~ 3311174 (+)
G2142212 NA non-coding upstream 4760 2999441 ~ 3000124 (+)
G2142206 NA non-coding upstream 11235 2983901 ~ 2993649 (+)
G2142208 NA non-coding upstream 14599 2984969 ~ 2990285 (+)
G2142209 NA non-coding upstream 18773 2985158 ~ 2986111 (+)
G2142205 NA non-coding upstream 29301 2972624 ~ 2975583 (+)
G2142276 NA non-coding downstream 77538 3082715 ~ 3082964 (+)
G2142278 NA non-coding downstream 79263 3084440 ~ 3084796 (+)
G2142280 NA non-coding downstream 80060 3085237 ~ 3085447 (+)
G2142235 NA non-coding downstream 88612 3093789 ~ 3095412 (+)
G2142365 NA non-coding downstream 247409 3252586 ~ 3254631 (+)
LOC110509554 LOC105007341 other upstream 1063893 1935597 ~ 1941376 (+)
LOC110509295 LOC106562719 other upstream 1426325 1572502 ~ 1618684 (+)
LOC110509506 LOC106562870 other upstream 1575150 1271496 ~ 1429741 (+)
G2139520 LOC106562868 other upstream 2151097 852249 ~ 853787 (+)
LOC110509291 LOC106562839 other upstream 2414080 536258 ~ 614583 (+)
G2142277 NA other downstream 78040 3083217 ~ 3083571 (+)
G2142386 LOC106562824 other downstream 313772 3318949 ~ 3324094 (+)
G2144385 NA other downstream 2022574 5027751 ~ 5028239 (+)
G2144416 NA other downstream 2030012 5035189 ~ 5035913 (+)
G2144756 NA other downstream 2278684 5283861 ~ 5284603 (+)

Expression


Co-expression Network