G2142276



Basic Information


Item Value
gene id G2142276
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 3082715 ~ 3082964 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2450178
TAATAGGAGTGACCTACTATTGGAGGTATTAATGTTATGGGTGTAGTAGTGAGATTCTGCAGGGTCTCAGCACATTCGGGTGTGGAAGGGAATGAAATTGTAGACCAGTTAACCAAAAGAGCTTTGaaatgagatacagtgccttgcgaaagtattcggccccttcgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagt

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2450178 True 250 lncRNA 0.40 1 3082715 3082964

Neighbor


gene id symbol gene type direction distance location
LOC110509518 LOC106578716 coding upstream 423339 2656641 ~ 2659376 (+)
trnas-cga-51 NA coding upstream 598362 2484272 ~ 2484353 (+)
LOC118945387 NA coding upstream 731906 2350691 ~ 2350809 (+)
LOC118945463 NA coding upstream 732202 2350395 ~ 2350513 (+)
LOC118945457 NA coding upstream 732498 2350099 ~ 2350217 (+)
LOC110509521 LOC100195713 coding downstream 5075 3088039 ~ 3142362 (+)
LOC110509522 gstt2b coding downstream 82347 3165311 ~ 3170636 (+)
LOC110509523 ppp6c coding downstream 153846 3236810 ~ 3261067 (+)
LOC118945358 LOC106570398 coding downstream 191444 3274408 ~ 3287599 (+)
LOC110509524 LOC106562843 coding downstream 209226 3292190 ~ 3311174 (+)
G2142214 NA non-coding upstream 77538 3004884 ~ 3005177 (+)
G2142212 NA non-coding upstream 82591 2999441 ~ 3000124 (+)
G2142206 NA non-coding upstream 89066 2983901 ~ 2993649 (+)
G2142208 NA non-coding upstream 92430 2984969 ~ 2990285 (+)
G2142209 NA non-coding upstream 96604 2985158 ~ 2986111 (+)
G2142278 NA non-coding downstream 1476 3084440 ~ 3084796 (+)
G2142280 NA non-coding downstream 2273 3085237 ~ 3085447 (+)
G2142235 NA non-coding downstream 10825 3093789 ~ 3095412 (+)
G2142365 NA non-coding downstream 169622 3252586 ~ 3254631 (+)
G2142386 LOC106562824 non-coding downstream 238794 3318949 ~ 3324094 (+)
LOC110509554 LOC105007341 other upstream 1141724 1935597 ~ 1941376 (+)
LOC110509295 LOC106562719 other upstream 1504156 1572502 ~ 1618684 (+)
LOC110509506 LOC106562870 other upstream 1652981 1271496 ~ 1429741 (+)
G2139520 LOC106562868 other upstream 2228928 852249 ~ 853787 (+)
LOC110509291 LOC106562839 other upstream 2491911 536258 ~ 614583 (+)
G2142277 NA other downstream 253 3083217 ~ 3083571 (+)
G2144385 NA other downstream 1944787 5027751 ~ 5028239 (+)
G2144416 NA other downstream 1952225 5035189 ~ 5035913 (+)
G2144756 NA other downstream 2200897 5283861 ~ 5284603 (+)

Expression



Co-expression Network