G2142278


Basic Information

Item Value
gene id G2142278
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 3084440 ~ 3084796 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2450180
cgaatactttcgcaaggcactgtataattggTAGTAATGTTTCACTGGGTAGAGGTGAGGCTAAATGTAAGATCAGAGCCATTTTGATAGATGTGTGACAGAAGAGATAGGACTCTGAGCCCAAGGGCTGTCATTTATATGCCCTCCAAATAAAGGTTGGTGGACCAAGATTCAAAAGTCAAATTatggaggaagaggtggtgtTTGTTCGATTGCACTTAGGACATTGTACATTGAACCTGTTATTACATCTGGTTGGCAAGTATGTGAATGGTTTGTGTCTGGATAATATGGTCGATGAAACGGTGGAGCAtgtgttgttatattgttgtAAGTATGTTGAAGAGAGGTAAAGAT

Function

NR:

description
PREDICTED: uncharacterized protein LOC109201852

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2450180 True 357 lncRNA 0.40 1 3084440 3084796

Neighbor

gene id symbol gene type direction distance location
LOC110509518 LOC106578716 coding upstream 425064 2656641 ~ 2659376 (+)
trnas-cga-51 NA coding upstream 600087 2484272 ~ 2484353 (+)
LOC118945387 NA coding upstream 733631 2350691 ~ 2350809 (+)
LOC118945463 NA coding upstream 733927 2350395 ~ 2350513 (+)
LOC118945457 NA coding upstream 734223 2350099 ~ 2350217 (+)
LOC110509521 LOC100195713 coding downstream 3243 3088039 ~ 3142362 (+)
LOC110509522 gstt2b coding downstream 80515 3165311 ~ 3170636 (+)
LOC110509523 ppp6c coding downstream 152014 3236810 ~ 3261067 (+)
LOC118945358 LOC106570398 coding downstream 189612 3274408 ~ 3287599 (+)
LOC110509524 LOC106562843 coding downstream 207394 3292190 ~ 3311174 (+)
G2142276 NA non-coding upstream 1476 3082715 ~ 3082964 (+)
G2142214 NA non-coding upstream 79263 3004884 ~ 3005177 (+)
G2142212 NA non-coding upstream 84316 2999441 ~ 3000124 (+)
G2142206 NA non-coding upstream 90791 2983901 ~ 2993649 (+)
G2142280 NA non-coding downstream 441 3085237 ~ 3085447 (+)
G2142235 NA non-coding downstream 8993 3093789 ~ 3095412 (+)
G2142365 NA non-coding downstream 167790 3252586 ~ 3254631 (+)
G2142386 LOC106562824 non-coding downstream 236962 3318949 ~ 3324094 (+)
G2142440 NA non-coding downstream 314294 3399090 ~ 3401178 (+)
G2142277 NA other upstream 869 3083217 ~ 3083571 (+)
LOC110509554 LOC105007341 other upstream 1143449 1935597 ~ 1941376 (+)
LOC110509295 LOC106562719 other upstream 1505881 1572502 ~ 1618684 (+)
LOC110509506 LOC106562870 other upstream 1654706 1271496 ~ 1429741 (+)
G2139520 LOC106562868 other upstream 2230653 852249 ~ 853787 (+)
G2144385 NA other downstream 1942955 5027751 ~ 5028239 (+)
G2144416 NA other downstream 1950393 5035189 ~ 5035913 (+)
G2144756 NA other downstream 2199065 5283861 ~ 5284603 (+)
G2144802 NA other downstream 2275190 5359986 ~ 5375497 (+)

Expression


Co-expression Network