G2142235


Basic Information

Item Value
gene id G2142235
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 3093789 ~ 3095412 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2450125
AACTCATAAGCAGGCCATGTCATATTTGTTTCATAGTCGATATATTATCATATTTCATGACAGTGTAACGGTTAACTTTTTTTTACAGGAGGATGAAAGAATACAATATTTCTGTCACGAAGAGTTTTTGCAGCGTGTAGATGGTGCAGagaGCGAGCTGATCAAGGGGTCGAAAATGTAGATATTTCCAGATGTTCACGGTTCGAGGAACAGGCCGTGGAAGCTTTACTGtggcaaaagtgtccataaccagaggtaaTATCAGCTGTCTTGATGAACCCCTgccgcatctgaactggctgacacagagggcacagcatgatcctaggggtgatttgatgtgagagaggaagccagtccgGTCATCGacacctcacccgctcttaagataaccttcgggctgactgggagcccaaggctggttatgaactgagagaatattagggtagcacagTAATTCATTAAACATATGCTGTCTGCCGCTGTTCTTATCtatttccctttctgtcttctacacctctctcttcctcgttttataatgcacaccatatgtgcattgaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2450125 True 561 lncRNA 0.44 4 3093789 3095412

Neighbor

gene id symbol gene type direction distance location
LOC110509518 LOC106578716 coding upstream 434413 2656641 ~ 2659376 (+)
trnas-cga-51 NA coding upstream 609436 2484272 ~ 2484353 (+)
LOC118945387 NA coding upstream 742980 2350691 ~ 2350809 (+)
LOC118945463 NA coding upstream 743276 2350395 ~ 2350513 (+)
LOC118945457 NA coding upstream 743572 2350099 ~ 2350217 (+)
LOC110509522 gstt2b coding downstream 69899 3165311 ~ 3170636 (+)
LOC110509523 ppp6c coding downstream 141398 3236810 ~ 3261067 (+)
LOC118945358 LOC106570398 coding downstream 178996 3274408 ~ 3287599 (+)
LOC110509524 LOC106562843 coding downstream 196778 3292190 ~ 3311174 (+)
LOC118945281 NA coding downstream 226747 3322159 ~ 3368426 (+)
G2142280 NA non-coding upstream 8342 3085237 ~ 3085447 (+)
G2142278 NA non-coding upstream 8993 3084440 ~ 3084796 (+)
G2142276 NA non-coding upstream 10825 3082715 ~ 3082964 (+)
G2142214 NA non-coding upstream 88612 3004884 ~ 3005177 (+)
G2142212 NA non-coding upstream 93665 2999441 ~ 3000124 (+)
G2142365 NA non-coding downstream 157174 3252586 ~ 3254631 (+)
G2142386 LOC106562824 non-coding downstream 226346 3318949 ~ 3324094 (+)
G2142440 NA non-coding downstream 303678 3399090 ~ 3401178 (+)
G2142441 NA non-coding downstream 304310 3399722 ~ 3401689 (+)
G2142533 NA non-coding downstream 445770 3541182 ~ 3541398 (+)
G2142277 NA other upstream 10218 3083217 ~ 3083571 (+)
LOC110509554 LOC105007341 other upstream 1152798 1935597 ~ 1941376 (+)
LOC110509295 LOC106562719 other upstream 1515230 1572502 ~ 1618684 (+)
LOC110509506 LOC106562870 other upstream 1664055 1271496 ~ 1429741 (+)
G2139520 LOC106562868 other upstream 2240002 852249 ~ 853787 (+)
G2144385 NA other downstream 1932339 5027751 ~ 5028239 (+)
G2144416 NA other downstream 1939777 5035189 ~ 5035913 (+)
G2144756 NA other downstream 2188449 5283861 ~ 5284603 (+)
G2144802 NA other downstream 2264574 5359986 ~ 5375497 (+)

Expression


Co-expression Network