G2142365


Basic Information

Item Value
gene id G2142365
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 3252586 ~ 3254631 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2450269
ctgttggttaagggcttttcagtaagcatttcacagtaaagtctacactgttggttaagggcttttcagtaagcatttcacagtaaagtctacactgttggttaagggcttttcagtaagcatttcacagtaaagtctacactgttggttaagggcttttcagtaagcatttcacagtaaagtctacactgttggttaagggcttttcagtaaagcatttcacagtaaagtctacactgttggttaagggcttttcagtaagcatttcacagtaaagtctacactgttggttaagggcttttcagtaagcatttcacagtaaagtctacactgttggttaagggcttttcagtaagcatttcacggtaaagtctacacttgtagtCATatcatgtggcaaataaagtgtATGAgaaatgtaagatatgtaaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2450269 True 434 lncRNA 0.37 2 3252586 3254631

Neighbor

gene id symbol gene type direction distance location
LOC110509522 gstt2b coding upstream 81950 3165311 ~ 3170636 (+)
LOC110509521 LOC100195713 coding upstream 110224 3088039 ~ 3142362 (+)
LOC110509518 LOC106578716 coding upstream 593210 2656641 ~ 2659376 (+)
trnas-cga-51 NA coding upstream 768233 2484272 ~ 2484353 (+)
LOC118945387 NA coding upstream 901777 2350691 ~ 2350809 (+)
LOC118945358 LOC106570398 coding downstream 19777 3274408 ~ 3287599 (+)
LOC110509524 LOC106562843 coding downstream 37559 3292190 ~ 3311174 (+)
LOC118945281 NA coding downstream 67528 3322159 ~ 3368426 (+)
LOC118945361 NA coding downstream 290416 3545047 ~ 3555150 (+)
LOC110509527 NA coding downstream 451115 3705668 ~ 3731529 (+)
G2142235 NA non-coding upstream 157174 3093789 ~ 3095412 (+)
G2142280 NA non-coding upstream 167139 3085237 ~ 3085447 (+)
G2142278 NA non-coding upstream 167790 3084440 ~ 3084796 (+)
G2142276 NA non-coding upstream 169622 3082715 ~ 3082964 (+)
G2142214 NA non-coding upstream 247409 3004884 ~ 3005177 (+)
G2142386 LOC106562824 non-coding downstream 67127 3318949 ~ 3324094 (+)
G2142440 NA non-coding downstream 144459 3399090 ~ 3401178 (+)
G2142441 NA non-coding downstream 145091 3399722 ~ 3401689 (+)
G2142533 NA non-coding downstream 286551 3541182 ~ 3541398 (+)
G2142543 NA non-coding downstream 305523 3560154 ~ 3560397 (+)
G2142277 NA other upstream 169015 3083217 ~ 3083571 (+)
LOC110509554 LOC105007341 other upstream 1311595 1935597 ~ 1941376 (+)
LOC110509295 LOC106562719 other upstream 1674027 1572502 ~ 1618684 (+)
LOC110509506 LOC106562870 other upstream 1822852 1271496 ~ 1429741 (+)
G2139520 LOC106562868 other upstream 2398799 852249 ~ 853787 (+)
G2144385 NA other downstream 1773120 5027751 ~ 5028239 (+)
G2144416 NA other downstream 1780558 5035189 ~ 5035913 (+)
G2144756 NA other downstream 2029230 5283861 ~ 5284603 (+)
G2144802 NA other downstream 2105355 5359986 ~ 5375497 (+)

Expression


Co-expression Network