G2142546


Basic Information

Item Value
gene id G2142546
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 3563896 ~ 3564120 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2450467
gcctggaggtgtgtcggtcattgtcctgtcgaaaaacaaatgatagtcccactaagcacaaaccagatgggatgtcgtatcgctgcagaatgctatggtagccatcttggttaagtgtgccttgattaataaccagcaaagcacccccacaccatcacacctcctcctccatgcttcacagtgggaaccacacatgcggacatCATCCGTTTGCCTACTCTGCGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2450467 True 225 lncRNA 0.50 1 3563896 3564120

Neighbor

gene id symbol gene type direction distance location
LOC118945361 NA coding upstream 8746 3545047 ~ 3555150 (+)
LOC118945281 NA coding upstream 195470 3322159 ~ 3368426 (+)
LOC110509524 LOC106562843 coding upstream 252722 3292190 ~ 3311174 (+)
LOC118945358 LOC106570398 coding upstream 276297 3274408 ~ 3287599 (+)
LOC110509523 ppp6c coding upstream 302829 3236810 ~ 3261067 (+)
LOC110509527 NA coding downstream 141626 3705668 ~ 3731529 (+)
LOC110509530 LOC106562884 coding downstream 558286 4122406 ~ 4124726 (+)
LOC110509300 NA coding downstream 605982 4170102 ~ 4207105 (+)
LOC110509532 LOC106562866 coding downstream 910514 4474634 ~ 4485633 (+)
LOC110509354 pde4d coding downstream 1182230 4746350 ~ 4777161 (+)
G2142543 NA non-coding upstream 3499 3560154 ~ 3560397 (+)
G2142533 NA non-coding upstream 22498 3541182 ~ 3541398 (+)
G2142441 NA non-coding upstream 162207 3399722 ~ 3401689 (+)
G2142440 NA non-coding upstream 162718 3399090 ~ 3401178 (+)
G2142386 LOC106562824 non-coding upstream 239802 3318949 ~ 3324094 (+)
G2142548 NA non-coding downstream 2488 3566608 ~ 3566822 (+)
G2142555 NA non-coding downstream 8424 3572544 ~ 3572791 (+)
G2142572 NA non-coding downstream 33252 3597372 ~ 3597630 (+)
G2142574 NA non-coding downstream 35367 3599487 ~ 3600140 (+)
G2142575 NA non-coding downstream 37485 3601605 ~ 3602091 (+)
G2142277 NA other upstream 480325 3083217 ~ 3083571 (+)
LOC110509554 LOC105007341 other upstream 1622905 1935597 ~ 1941376 (+)
LOC110509295 LOC106562719 other upstream 1985337 1572502 ~ 1618684 (+)
LOC110509506 LOC106562870 other upstream 2134162 1271496 ~ 1429741 (+)
G2144385 NA other downstream 1463631 5027751 ~ 5028239 (+)
G2144416 NA other downstream 1471069 5035189 ~ 5035913 (+)
G2144756 NA other downstream 1719741 5283861 ~ 5284603 (+)
G2144802 NA other downstream 1795866 5359986 ~ 5375497 (+)
LOC110509544 LOC106562892 other downstream 2041929 5605462 ~ 5611062 (+)

Expression


Co-expression Network