LOC110522769 (LOC106613976)


Basic Information

Item Value
gene id LOC110522769
gene name LOC106613976
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 26315974 ~ 26358491 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110522769
ATGGGCAACCAGGTGATGGAAGAGCTCATCCCCTTGGTCAACAGGTTGCAGGACgccttcagcaccatggaccaGAGCTGCAACCTGGACCTGCCACATATAGCAGTAGTTGGCGGCCAGAGCGCAGGGAAAGATTTTCAGGAGGTTTGTCAGGAGATCGAAGCAGAGACCGTGAGACTGACTGGAACCAATAAGGGTTCTCTCCTGTCCCCATCAACCTACGAGTCTATTCCCCTCAcgTGTTGAACCTGACCCTGGTAGATCTACCTGGCATGACCAAGGTACCTGTAGGAGATCAGCCTACTGATATAGAGTACCAGGAGAGGGACATGATCATGCAGTTTATCTGTAGAGACAACTGCCTGGTCCTGGCTGTTACTCCAGCTAACATGGGCCTGGCCAACTCTGAGGCGCTCAAACTGGCCAAGGACGTCGACCCTCAAGGCCAGCGGACCACAGGGGGATCACTAAATTAGATCTGATGGACGAGGGAACAGATGCCCGGCACATACTCGAGAACAGGCTACTGCCActacgtgcgtgttacATTGGGGTGGTGAATCGTAGTCAGAAGGACATTGATGAGAGGAAGGACATTAAGGCAGCTCTGGCTGGAGAGAGGAAGTTTTTCCTGTCTCACCCTGCATACAGACACATGGTTGACAGCATGGGTACCGCGCCTCTGAAGAGAGTCCTCAACcagCAACTGACCAACCACATCCGAGACAGTCTAAAAGCATTCTGCAGTCGTCTCCAGAGCCAGCTCCTACCGCTGGATAAAGAGGCTAAGGAGTTCAAACACTACAGAGCTGATGACCCCGCACGCAAGACCAAGTCCCTGCTACTTCTGGTGCAGCAGTTTGCAGCAGACTTTGAGAAGCGTTTTGAGGGTTTAGGAGACCAGGTGGACACCTATAGAACTGTCTGGAGGAGCCAAGTTCAATCGCATCTTCCACGAACGCTTCCACTTCGAACTGGTCACGGTCATCCGTAAGGGCTGGCTTACCATCAATCAGTATCATCAAGGGTGGGACCAAGGAGTACTGGTTTGTCCTGACCGCTGAGAGCCTGTCCTGGTTCAAGGATGATAAGGAGAAAGAGAATAAGTACATGTTACCATTGGATAACCTGAAGCTGAGAGGTGTGAAGAGCAGCTTCATGTCCAGTAAACATGCCTACTCCATCTTCAGCACCGAACAGAGGAACGTGTATAAGGACTACGGGTTCTTGGAGCTGGCGTTTGGCTCTCAGGAGGAGGTAGACAGCTGGAAAGCTTCTCTGCTGAGATCCGGAGTCTATCCTGAGAAAGTCACTGTTGATAAGGAGAGTAATGGTTCTAGTGATAGTTTCTCTATGGACCCTCAGTTGGAGCGTCAAGGAGAGACCATCCGGGAACCTGGTGGACTCCTACATGAACATAATTTACAAAGCCATTAGAGACCTCGTGCCCAAGACCGCCATGCACCTCATGGTCTGTgTAAAGGAGTGCATCCGTAATGACCTCCTGGTGCAGCTCTACTCTCTAACAGAGAAGTGTGTGTTGATGGATGAGTatccaggggagagaggaggcactGAGGACTCACGCTGCCTTGGAGGCGCTGGCCATCATCGGAGACATCTCTACCTCCACCTGCtccactcctctacctcctcctgttGACTCCTTCTGGCTGCATGGAGCCACTTCGACCAGCCGCaggtaacacacaaacacacacgagtGCACACATATCAATAACGCTAACCACCTTCCCTCAGGTCTCACAGTTCTACAGCTCTAGCTCCTAAGCATATAGCCTCTGCTCCCAGAGCCCCCACCATCCACCAGAGGCCCCACCTCCATGACGTTACTAGTCTCCTCCGTGCTGCACCTCATCCTCATGGACCAACCAGCAACAACGCTGATACCAACCAGTCTCCACCAGGCAGACTTATCAGATTGCCCCCCCAATGTACCCAGGTAACCATGACGCCGATGTTCggggaagcaggtagcctagaggttagagtgttgggccagtaacctaaaggtcACTAGTTctaatccccgaactgacaaggtgaaaaatcgtTCCCTTGAGAagagcacttaaccctaattgctccagggatGCTGTTGACAATGGCAgactgtgaccccactctctgaggttGTCTCGGGGAGTTGGGATatgaaaaaaacatttccaattcCCACA

Function

NR:

description
dynamin-3-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110522769 True 2201 mRNA 0.52 15 26315974 26358491

Neighbor

gene id symbol gene type direction distance location
LOC110521625 mettl13 coding upstream 1257 26312180 ~ 26314731 (+)
LOC110521624 myoc coding upstream 11254 26292253 ~ 26304720 (+)
LOC118945901 NA coding upstream 16949 26298973 ~ 26299025 (+)
LOC110521623 vamp4 coding upstream 33581 26257937 ~ 26282393 (+)
LOC110521622 prrc2c coding upstream 63881 26202239 ~ 26252093 (+)
LOC110521629 LOC106584269 coding downstream 87956 26446447 ~ 26457719 (+)
LOC110521630 mysm1 coding downstream 99314 26457805 ~ 26478401 (+)
oma1 oma1 coding downstream 118544 26477035 ~ 26501552 (+)
LOC110521633 LOC106584207 coding downstream 337318 26695809 ~ 26795605 (+)
LOC110521632 LOC106584206 coding downstream 437711 26796202 ~ 26822332 (+)
G2217047 NA non-coding upstream 398274 25916976 ~ 25917700 (+)
G2217031 NA non-coding upstream 416120 25899224 ~ 25899854 (+)
LOC110521610 NA non-coding upstream 628035 25682300 ~ 25687956 (+)
LOC110521605 NA non-coding upstream 889100 25412311 ~ 25426874 (+)
G2217304 NA non-coding downstream 15310 26373801 ~ 26398614 (+)
G2217315 NA non-coding downstream 32418 26390909 ~ 26391160 (+)
G2217476 NA non-coding downstream 313012 26671503 ~ 26671724 (+)
G2217502 NA non-coding downstream 371043 26729534 ~ 26729883 (+)
G2217159 LOC106584278 other upstream 182930 26127054 ~ 26133044 (+)
LOC110521611 LOC106584283 other upstream 503668 25688091 ~ 25825503 (+)
LOC110522768 LOC106584287 other upstream 727459 25566527 ~ 25590680 (+)
G2216357 NA other upstream 942364 25364252 ~ 25373610 (+)
G2216024 LOC106584303 other upstream 1202376 25030998 ~ 25174051 (+)
G2217442 NA other downstream 249032 26607523 ~ 26607943 (+)
G2218483 NA other downstream 866883 27225374 ~ 27226305 (+)
LOC110521646 LOC106584219 other downstream 1139386 27497328 ~ 27519290 (+)
LOC110521656 LOC106584103 other downstream 1479417 27823914 ~ 27844041 (+)

Expression


Co-expression Network