tmem165 (LOC106584122)


Basic Information

Item Value
gene id tmem165
gene name LOC106584122
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 28769232 ~ 28774166 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021599415.2
CACATTAGTGGTTTACTGTCTTTCAGGTAGCACgttcacaatttaaaaaaaatcccgtATGAGTTCTATCCAAAGCAGAAATGGTTATATCCTCAATGGTTCAATTGGCAAGCTTTTCTACCAACACCAACTAGCTATGTAGTGAATGGAAGGGCTAACATAAGTATGATGCGTGTCCTGCTGCCCCTGGTTGTCGCGGTGTTGTCAGCTGGAGTTTCTGGAATACAGGAGGAACACAAACCAGTCCAAGAACAACCGCAACAAGAGAAAACACCAACTGCTCATGCTATTGGCCCAGAGGTCAGTGAAAATGATTCCAGCAAATCTGGTGACCTGGGCTTCATCCATGCCTTTGTTGCTGCCATCTCTGTCATCATTGTCTCTGAGCTGGGAGACAAGACTTTCTTCATCGCTGCCATCATGGCTATGCGCTACAACCGCCTCACTGTGCTGTTAGGGGCAATGCTAGCGCTTGGCATTATGACCTGCCTTTCAGTGATGTTTGGCTATGCCACCACCATCATCCCCAGGATCTACACATACTATGTGTCCACAGCTCTGTTTGCCATCTTTGGTGTTCGCATGCTGAGAGAGGGGCTGAAAATGAGTCCAGACGAGGGtcaggaggagctggaggaggtgcAGGCTGAGATTAAAAAGAAGGATGAGGAGCTCCAGCGGTCTAAGCTGGTGAATGGGGCTTCAGATGTGGAGTTGGGCTCAGGGTCAAGCCATCCTCAGGGGAGATGGCACAGCTTCATCTCGCCTGTGTTCATCCAGGCCTTCACCCTCACCTTCCTTGCAGAGTGGGGAGACCGCTCTCAGCTGACCACCATCATCTTGGCTGCCCGGGAGGATCCTTTTGGAGTGGCAGTGGGTGGTACTCTGGGACACTGTCTGTGCACAGGACTGGCTGTGGTTGGAGGAAGGATGATTGCACAGAAGATCTCTGTCAGAACTGTTACAATCATTGGTGGGATAATGTTCCTGGCCTTTGCATTCTCTGCCCTCGTCGTCAAGCCAGATGCTGGAATCTGATTGGAGTACATACCTGTAAAGCTCAACTATGTGTATTTGGAGAGGCTGTACTCTTGACTCTGTGTGTACGACAGTTGTACTGTACTCATGGTGTGGGTGAGATATGGAGAATATTCTATAATGGGACTCTAAtgggtgagtgtgtctgtgtgaatgttGCCCTCTTGTCTTACTGAGTCTGTGATCCCTCACCGGTCTGAATCCTGTGGCTTACACACAGGACAAGACTTACGTCTCCCGCAGGCCTGTCGGTACTGATCTTGGGTCTGTTTTATTAATTCGTTCCCCATCCTCTGGTTATTATATTATGATTTAAGAGCAGCTCATTCATTGACTGAGTGCATGgaatctctcctcccctcttcagcATGAGCTCAGTGTTGTTGAACGCTGACTTCAGGGAAATCCCATGGAGGGCCAGTCTGTCTGTTATCTACCACTCAAATTACTACAACGGTTTATGAAGAGGTTGTGTGAGGCCTACTGATGAAGAAATCATGGAACAAAATACTTCATAGCTTCACTGCCATGTTTTGAGACCTGAGCCATTGTCTACTACACCTTTCCTGAAAGTGGTTGGTTATGGTATTTATTTACAACTTTTGAGCAGAGATTGGTATtgttaactttttatttttttagctgAAGTACTGTAGACACTATACTTTTTTAAAAAGTGCACAGGGAAATGTCACTACATTGTCAATATTTGACAAGTTGTACCCTGTGATGACCGACCAAGCGTGTACATGTACGCTGTTTGAGATATTCACTTCATTGTTAAAGCCTGATTAATGTAAATACTCAATAAAACCTGTCATGCCAAGA
>XM_036969387.1
GTGGTTTACTGTCTTTCAGAAGGAATGGAAGGGCTAACATAAGTATGATGCGTGTCCTGCTGCCCCTGGTTGTCGCGGTGTTGTCAGCTGGAGTTTCTGGAATACAGGAGGAACACAAACCAGTCCAAGAACAACCGCAACAAGAGAAAACACCAACTGCTCATGCTATTGGCCCAGAGGTCAGTGAAAATGATTCCAGCAAATCTGGTGACCTGGGCTTCATCCATGCCTTTGTTGCTGCCATCTCTGTCATCATTGTCTCTGAGCTGGGAGACAAGACTTTCTTCATCGCTGCCATCATGGCTATGCGCTACAACCGCCTCACTGTGCTGTTAGGGGCAATGCTAGCGCTTGGCATTATGACCTGCCTTTCAGTGATGTTTGGCTATGCCACCACCATCATCCCCAGGATCTACACATACTATGTGTCCACAGCTCTGTTTGCCATCTTTGGTGTTCGCATGCTGAGAGAGGGGCTGAAAATGAGTCCAGACGAGGGtcaggaggagctggaggaggtgcAGGCTGAGATTAAAAAGAAGGATGAGGAGCTCCAGCGGTCTAAGCTGGTGAATGGGGCTTCAGATGTGGAGTTGGGCTCAGGGTCAAGCCATCCTCAGGGGAGATGGCACAGCTTCATCTCGCCTGTGTTCATCCAGGCCTTCACCCTCACCTTCCTTGCAGAGTGGGGAGACCGCTCTCAGCTGACCACCATCATCTTGGCTGCCCGGGAGGATCCTTTTGGAGTGGCAGTGGGTGGTACTCTGGGACACTGTCTGTGCACAGGACTGGCTGTGGTTGGAGGAAGGATGATTGCACAGAAGATCTCTGTCAGAACTGTTACAATCATTGGTGGGATAATGTTCCTGGCCTTTGCATTCTCTGCCCTCGTCGTCAAGCCAGATGCTGGAATCTGATTGGAGTACATACCTGTAAAGCTCAACTATGTGTATTTGGAGAGGCTGTACTCTTGACTCTGTGTGTACGACAGTTGTACTGTACTCATGGTGTGGGTGAGATATGGAGAATATTCTATAATGGGACTCTAAtgggtgagtgtgtctgtgtgaatgttGCCCTCTTGTCTTACTGAGTCTGTGATCCCTCACCGGTCTGAATCCTGTGGCTTACACACAGGACAAGACTTACGTCTCCCGCAGGCCTGTCGGTACTGATCTTGGGTCTGTTTTATTAATTCGTTCCCCATCCTCTGGTTATTATATTATGATTTAAGAGCAGCTCATTCATTGACTGAGTGCATGgaatctctcctcccctcttcagcATGAGCTCAGTGTTGTTGAACGCTGACTTCAGGGAAATCCCATGGAGGGCCAGTCTGTCTGTTATCTACCACTCAAATTACTACAACGGTTTATGAAGAGGTTGTGTGAGGCCTACTGATGAAGAAATCATGGAACAAAATACTTCATAGCTTCACTGCCATGTTTTGAGACCTGAGCCATTGTCTACTACACCTTTCCTGAAAGTGGTTGGTTATGGTATTTATTTACAACTTTTGAGCAGAGATTGGTATtgttaactttttatttttttagctgAAGTACTGTAGACACTATACTTTTTTAAAAAGTGCACAGGGAAATGTCACTACATTGTCAATATTTGACAAGTTGTACCCTGTGATGACCGACCAAGCGTGTACATGTACGCTGTTTGAGATATTCACTTCATTGTTAAAGCCTGATTAATGTAAATACTCAATAAAACCTGTCATGCCAAGA
>XM_036969388.1
GTGGTTTACTGTCTTTCAGGAATGGAAGGGCTAACATAAGTATGATGCGTGTCCTGCTGCCCCTGGTTGTCGCGGTGTTGTCAGCTGGAGTTTCTGGAATACAGGAGGAACACAAACCAGTCCAAGAACAACCGCAACAAGAGAAAACACCAACTGCTCATGCTATTGGCCCAGAGGTCAGTGAAAATGATTCCAGCAAATCTGGTGACCTGGGCTTCATCCATGCCTTTGTTGCTGCCATCTCTGTCATCATTGTCTCTGAGCTGGGAGACAAGACTTTCTTCATCGCTGCCATCATGGCTATGCGCTACAACCGCCTCACTGTGCTGTTAGGGGCAATGCTAGCGCTTGGCATTATGACCTGCCTTTCAGTGATGTTTGGCTATGCCACCACCATCATCCCCAGGATCTACACATACTATGTGTCCACAGCTCTGTTTGCCATCTTTGGTGTTCGCATGCTGAGAGAGGGGCTGAAAATGAGTCCAGACGAGGGtcaggaggagctggaggaggtgcAGGCTGAGATTAAAAAGAAGGATGAGGAGCTCCAGCGGTCTAAGCTGGTGAATGGGGCTTCAGATGTGGAGTTGGGCTCAGGGTCAAGCCATCCTCAGGGGAGATGGCACAGCTTCATCTCGCCTGTGTTCATCCAGGCCTTCACCCTCACCTTCCTTGCAGAGTGGGGAGACCGCTCTCAGCTGACCACCATCATCTTGGCTGCCCGGGAGGATCCTTTTGGAGTGGCAGTGGGTGGTACTCTGGGACACTGTCTGTGCACAGGACTGGCTGTGGTTGGAGGAAGGATGATTGCACAGAAGATCTCTGTCAGAACTGTTACAATCATTGGTGGGATAATGTTCCTGGCCTTTGCATTCTCTGCCCTCGTCGTCAAGCCAGATGCTGGAATCTGATTGGAGTACATACCTGTAAAGCTCAACTATGTGTATTTGGAGAGGCTGTACTCTTGACTCTGTGTGTACGACAGTTGTACTGTACTCATGGTGTGGGTGAGATATGGAGAATATTCTATAATGGGACTCTAAtgggtgagtgtgtctgtgtgaatgttGCCCTCTTGTCTTACTGAGTCTGTGATCCCTCACCGGTCTGAATCCTGTGGCTTACACACAGGACAAGACTTACGTCTCCCGCAGGCCTGTCGGTACTGATCTTGGGTCTGTTTTATTAATTCGTTCCCCATCCTCTGGTTATTATATTATGATTTAAGAGCAGCTCATTCATTGACTGAGTGCATGgaatctctcctcccctcttcagcATGAGCTCAGTGTTGTTGAACGCTGACTTCAGGGAAATCCCATGGAGGGCCAGTCTGTCTGTTATCTACCACTCAAATTACTACAACGGTTTATGAAGAGGTTGTGTGAGGCCTACTGATGAAGAAATCATGGAACAAAATACTTCATAGCTTCACTGCCATGTTTTGAGACCTGAGCCATTGTCTACTACACCTTTCCTGAAAGTGGTTGGTTATGGTATTTATTTACAACTTTTGAGCAGAGATTGGTATtgttaactttttatttttttagctgAAGTACTGTAGACACTATACTTTTTTAAAAAGTGCACAGGGAAATGTCACTACATTGTCAATATTTGACAAGTTGTACCCTGTGATGACCGACCAAGCGTGTACATGTACGCTGTTTGAGATATTCACTTCATTGTTAAAGCCTGATTAATGTAAATACTCAATAAAACCTGTCATGCCAAGA
>XM_021599414.2
aaatcccgtATGAGTTCTATCCAAAGCAGAAATGGTTATATCCTCAATGGTTCAATTGGCAAGCTTTTCTACCAACACCAACTAGCTATGTAGTGTACGTCTAGCTAATTTTATCGAGTGGTTTACGCAGTCAGGGGCAGTGATTTTTATCATTTAACCCATACGCTTATGTAAACTGCCTTTATTATCAGCATTTTTAACACAATCTGATTGCTTCCCTTTGTTAAAATGTATCTACTGGCCGGCAGAAGGAATGGAAGGGCTAACATAAGTATGATGCGTGTCCTGCTGCCCCTGGTTGTCGCGGTGTTGTCAGCTGGAGTTTCTGGAATACAGGAGGAACACAAACCAGTCCAAGAACAACCGCAACAAGAGAAAACACCAACTGCTCATGCTATTGGCCCAGAGGTCAGTGAAAATGATTCCAGCAAATCTGGTGACCTGGGCTTCATCCATGCCTTTGTTGCTGCCATCTCTGTCATCATTGTCTCTGAGCTGGGAGACAAGACTTTCTTCATCGCTGCCATCATGGCTATGCGCTACAACCGCCTCACTGTGCTGTTAGGGGCAATGCTAGCGCTTGGCATTATGACCTGCCTTTCAGTGATGTTTGGCTATGCCACCACCATCATCCCCAGGATCTACACATACTATGTGTCCACAGCTCTGTTTGCCATCTTTGGTGTTCGCATGCTGAGAGAGGGGCTGAAAATGAGTCCAGACGAGGGtcaggaggagctggaggaggtgcAGGCTGAGATTAAAAAGAAGGATGAGGAGCTCCAGCGGTCTAAGCTGGTGAATGGGGCTTCAGATGTGGAGTTGGGCTCAGGGTCAAGCCATCCTCAGGGGAGATGGCACAGCTTCATCTCGCCTGTGTTCATCCAGGCCTTCACCCTCACCTTCCTTGCAGAGTGGGGAGACCGCTCTCAGCTGACCACCATCATCTTGGCTGCCCGGGAGGATCCTTTTGGAGTGGCAGTGGGTGGTACTCTGGGACACTGTCTGTGCACAGGACTGGCTGTGGTTGGAGGAAGGATGATTGCACAGAAGATCTCTGTCAGAACTGTTACAATCATTGGTGGGATAATGTTCCTGGCCTTTGCATTCTCTGCCCTCGTCGTCAAGCCAGATGCTGGAATCTGATTGGAGTACATACCTGTAAAGCTCAACTATGTGTATTTGGAGAGGCTGTACTCTTGACTCTGTGTGTACGACAGTTGTACTGTACTCATGGTGTGGGTGAGATATGGAGAATATTCTATAATGGGACTCTAAtgggtgagtgtgtctgtgtgaatgttGCCCTCTTGTCTTACTGAGTCTGTGATCCCTCACCGGTCTGAATCCTGTGGCTTACACACAGGACAAGACTTACGTCTCCCGCAGGCCTGTCGGTACTGATCTTGGGTCTGTTTTATTAATTCGTTCCCCATCCTCTGGTTATTATATTATGATTTAAGAGCAGCTCATTCATTGACTGAGTGCATGgaatctctcctcccctcttcagcATGAGCTCAGTGTTGTTGAACGCTGACTTCAGGGAAATCCCATGGAGGGCCAGTCTGTCTGTTATCTACCACTCAAATTACTACAACGGTTTATGAAGAGGTTGTGTGAGGCCTACTGATGAAGAAATCATGGAACAAAATACTTCATAGCTTCACTGCCATGTTTTGAGACCTGAGCCATTGTCTACTACACCTTTCCTGAAAGTGGTTGGTTATGGTATTTATTTACAACTTTTGAGCAGAGATTGGTATtgttaactttttatttttttagctgAAGTACTGTAGACACTATACTTTTTTAAAAAGTGCACAGGGAAATGTCACTACATTGTCAATATTTGACAAGTTGTACCCTGTGATGACCGACCAAGCGTGTACATGTACGCTGTTTGAGATATTCACTTCATTGTTAAAGCCTGATTAATGTAAATACTCAATAAAACCTGTCATGCCAAGA
>XM_036969386.1
ACCAACTAGCTATGTAGTAAGGAATGGAAGGGCTAACATAAGTATGATGCGTGTCCTGCTGCCCCTGGTTGTCGCGGTGTTGTCAGCTGGAGTTTCTGGAATACAGGAGGAACACAAACCAGTCCAAGAACAACCGCAACAAGAGAAAACACCAACTGCTCATGCTATTGGCCCAGAGGTCAGTGAAAATGATTCCAGCAAATCTGGTGACCTGGGCTTCATCCATGCCTTTGTTGCTGCCATCTCTGTCATCATTGTCTCTGAGCTGGGAGACAAGACTTTCTTCATCGCTGCCATCATGGCTATGCGCTACAACCGCCTCACTGTGCTGTTAGGGGCAATGCTAGCGCTTGGCATTATGACCTGCCTTTCAGTGATGTTTGGCTATGCCACCACCATCATCCCCAGGATCTACACATACTATGTGTCCACAGCTCTGTTTGCCATCTTTGGTGTTCGCATGCTGAGAGAGGGGCTGAAAATGAGTCCAGACGAGGGtcaggaggagctggaggaggtgcAGGCTGAGATTAAAAAGAAGGATGAGGAGCTCCAGCGGTCTAAGCTGGTGAATGGGGCTTCAGATGTGGAGTTGGGCTCAGGGTCAAGCCATCCTCAGGGGAGATGGCACAGCTTCATCTCGCCTGTGTTCATCCAGGCCTTCACCCTCACCTTCCTTGCAGAGTGGGGAGACCGCTCTCAGCTGACCACCATCATCTTGGCTGCCCGGGAGGATCCTTTTGGAGTGGCAGTGGGTGGTACTCTGGGACACTGTCTGTGCACAGGACTGGCTGTGGTTGGAGGAAGGATGATTGCACAGAAGATCTCTGTCAGAACTGTTACAATCATTGGTGGGATAATGTTCCTGGCCTTTGCATTCTCTGCCCTCGTCGTCAAGCCAGATGCTGGAATCTGATTGGAGTACATACCTGTAAAGCTCAACTATGTGTATTTGGAGAGGCTGTACTCTTGACTCTGTGTGTACGACAGTTGTACTGTACTCATGGTGTGGGTGAGATATGGAGAATATTCTATAATGGGACTCTAAtgggtgagtgtgtctgtgtgaatgttGCCCTCTTGTCTTACTGAGTCTGTGATCCCTCACCGGTCTGAATCCTGTGGCTTACACACAGGACAAGACTTACGTCTCCCGCAGGCCTGTCGGTACTGATCTTGGGTCTGTTTTATTAATTCGTTCCCCATCCTCTGGTTATTATATTATGATTTAAGAGCAGCTCATTCATTGACTGAGTGCATGgaatctctcctcccctcttcagcATGAGCTCAGTGTTGTTGAACGCTGACTTCAGGGAAATCCCATGGAGGGCCAGTCTGTCTGTTATCTACCACTCAAATTACTACAACGGTTTATGAAGAGGTTGTGTGAGGCCTACTGATGAAGAAATCATGGAACAAAATACTTCATAGCTTCACTGCCATGTTTTGAGACCTGAGCCATTGTCTACTACACCTTTCCTGAAAGTGGTTGGTTATGGTATTTATTTACAACTTTTGAGCAGAGATTGGTATtgttaactttttatttttttagctgAAGTACTGTAGACACTATACTTTTTTAAAAAGTGCACAGGGAAATGTCACTACATTGTCAATATTTGACAAGTTGTACCCTGTGATGACCGACCAAGCGTGTACATGTACGCTGTTTGAGATATTCACTTCATTGTTAAAGCCTGATTAATGTAAATACTCAATAAAACCTGTCATGCCAAGA

Function

NR:

description
transmembrane protein 165 isoform X1

GO: NA

KEGG:

id description
K23541 TMEM165, GDT1; Ca2+/H+ antiporter, TMEM165/GDT1 family

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021599415.2 False 1866 mRNA 0.46 7 28769232 28774166
XM_036969387.1 False 1745 mRNA 0.47 7 28769239 28774166
XM_036969388.1 False 1742 mRNA 0.47 7 28769239 28774166
XM_021599414.2 False 1974 mRNA 0.46 6 28769281 28774166
XM_036969386.1 True 1744 mRNA 0.47 7 28769357 28774166

Neighbor

gene id symbol gene type direction distance location
srd5a3 srd5a3 coding upstream 607 28765363 ~ 28768625 (+)
LOC110521672 kit coding upstream 101318 28627916 ~ 28667914 (+)
pdgfra pdgfra coding upstream 192590 28555383 ~ 28576642 (+)
gsx2 gsx2 coding upstream 235777 28531955 ~ 28533455 (+)
fip1l1a fip1l1 coding upstream 461694 28260830 ~ 28307538 (+)
exoc1 exoc1 coding downstream 137399 28911565 ~ 28925770 (+)
cep135 cep135 coding downstream 151820 28925986 ~ 28944771 (+)
cracd kiaa1211 coding downstream 175230 28949396 ~ 28977677 (+)
si:dkeyp-117h8.4 LOC106584130 coding downstream 209017 28983183 ~ 28988575 (+)
paics LOC106584129 coding downstream 218442 28992608 ~ 29001492 (+)
G2220031 NA non-coding upstream 155106 28613919 ~ 28614126 (+)
G2220026 NA non-coding upstream 162633 28606269 ~ 28606599 (+)
G2220025 NA non-coding upstream 166388 28602635 ~ 28602844 (+)
G2219990 NA non-coding upstream 220315 28548400 ~ 28548917 (+)
G2219984 NA non-coding upstream 227326 28541588 ~ 28541906 (+)
G2220223 NA non-coding downstream 177917 28952083 ~ 28952436 (+)
G2220224 NA non-coding downstream 178427 28952593 ~ 28953950 (+)
G2220225 NA non-coding downstream 180058 28954224 ~ 28954455 (+)
G2220229 NA non-coding downstream 182969 28957135 ~ 28957485 (+)
G2220235 aasdh non-coding downstream 206326 28980492 ~ 28980755 (+)
G2219991 NA other upstream 219754 28549029 ~ 28549478 (+)
G2219989 LOC105940532 other upstream 221148 28547538 ~ 28548084 (+)
LOC110521656 LOC106584103 other upstream 925534 27823914 ~ 27844041 (+)
LOC110521646 LOC106584219 other upstream 1266552 27497328 ~ 27519290 (+)
G2220253 NA other downstream 247420 29021586 ~ 29021882 (+)
LOC110521703 LOC106584150 other downstream 2089658 30863624 ~ 30866524 (+)
G2225948 NA other downstream 4797974 33572140 ~ 33604894 (+)
LOC110521757 NA other downstream 6407803 35181902 ~ 35190209 (+)
G2228777 NA other downstream 6744068 35518234 ~ 35519242 (+)

Expression


Co-expression Network