G2217476


Basic Information

Item Value
gene id G2217476
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 26671503 ~ 26671724 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2536382
gggtgagacgtttacatacactcaattagtatttggtagcattgcctttaaattgtttatcttaggtcaaatgtttcaggtagccttccacaagcttcccacaataagttgggtgaattttggcccattcctcctgacagagctggtgtaactaagtcaggtttgtaggcctccttgctcgcacacgctttttcagttctgcccacacattttctatagggt

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2536382 True 222 lncRNA 0.43 1 26671503 26671724

Neighbor

gene id symbol gene type direction distance location
oma1 oma1 coding upstream 169951 26477035 ~ 26501552 (+)
LOC110521630 mysm1 coding upstream 193102 26457805 ~ 26478401 (+)
LOC110521629 LOC106584269 coding upstream 213784 26446447 ~ 26457719 (+)
LOC110522769 LOC106613976 coding upstream 313012 26315974 ~ 26358491 (+)
LOC110521625 mettl13 coding upstream 356786 26312180 ~ 26314731 (+)
LOC110521633 LOC106584207 coding downstream 24085 26695809 ~ 26795605 (+)
LOC110521632 LOC106584206 coding downstream 124478 26796202 ~ 26822332 (+)
plpp3 plpp3 coding downstream 175699 26847423 ~ 26906418 (+)
usp24 usp24 coding downstream 352214 27023938 ~ 27076744 (+)
dhcr24 dhcr24 coding downstream 428093 27099817 ~ 27122682 (+)
G2217304 NA non-coding upstream 272889 26373801 ~ 26398614 (+)
G2217315 NA non-coding upstream 280343 26390909 ~ 26391160 (+)
G2217277 NA non-coding upstream 346733 26318141 ~ 26324770 (+)
G2217047 NA non-coding upstream 753803 25916976 ~ 25917700 (+)
G2217502 NA non-coding downstream 57810 26729534 ~ 26729883 (+)
G2217392 NA non-coding downstream 77817 26749541 ~ 26757367 (+)
G2217517 NA non-coding downstream 97671 26769395 ~ 26770266 (+)
G2217518 NA non-coding downstream 98327 26770051 ~ 26771094 (+)
G2217442 NA other upstream 63560 26607523 ~ 26607943 (+)
G2217159 LOC106584278 other upstream 538459 26127054 ~ 26133044 (+)
LOC110521611 LOC106584283 other upstream 859197 25688091 ~ 25825503 (+)
LOC110522768 LOC106584287 other upstream 1082988 25566527 ~ 25590680 (+)
G2216357 NA other upstream 1297893 25364252 ~ 25373610 (+)
G2218483 NA other downstream 553650 27225374 ~ 27226305 (+)
LOC110521646 LOC106584219 other downstream 826153 27497328 ~ 27519290 (+)
LOC110521656 LOC106584103 other downstream 1166184 27823914 ~ 27844041 (+)
fip1l1a fip1l1 other downstream 1622171 28260830 ~ 28307538 (+)

Expression


Co-expression Network