Gene
RNA
| Item | Value |
|---|---|
| gene id | G2217527 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 26814058 ~ 26815608 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| calphotin-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2536435 | True | 497 | lncRNA | 0.36 | 2 | 26814058 | 26815608 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521633 | LOC106584207 | coding | upstream | 18453 | 26695809 ~ 26795605 (+) |
| oma1 | oma1 | coding | upstream | 312506 | 26477035 ~ 26501552 (+) |
| LOC110521630 | mysm1 | coding | upstream | 335657 | 26457805 ~ 26478401 (+) |
| LOC110521629 | LOC106584269 | coding | upstream | 356339 | 26446447 ~ 26457719 (+) |
| LOC110522769 | LOC106613976 | coding | upstream | 455567 | 26315974 ~ 26358491 (+) |
| plpp3 | plpp3 | coding | downstream | 31815 | 26847423 ~ 26906418 (+) |
| usp24 | usp24 | coding | downstream | 208330 | 27023938 ~ 27076744 (+) |
| dhcr24 | dhcr24 | coding | downstream | 284209 | 27099817 ~ 27122682 (+) |
| LOC110521639 | tmm27 | coding | downstream | 327397 | 27143005 ~ 27145888 (+) |
| LOC110522772 | NA | coding | downstream | 331744 | 27147352 ~ 27156672 (+) |
| G2217518 | NA | non-coding | upstream | 42964 | 26770051 ~ 26771094 (+) |
| G2217517 | NA | non-coding | upstream | 43792 | 26769395 ~ 26770266 (+) |
| G2217392 | NA | non-coding | upstream | 56691 | 26749541 ~ 26757367 (+) |
| G2217502 | NA | non-coding | upstream | 84175 | 26729534 ~ 26729883 (+) |
| G2217540 | NA | non-coding | downstream | 25543 | 26841151 ~ 26845834 (+) |
| G2217567 | NA | non-coding | downstream | 97855 | 26913463 ~ 26913791 (+) |
| G2217571 | NA | non-coding | downstream | 102403 | 26918011 ~ 26918225 (+) |
| G2217579 | NA | non-coding | downstream | 121455 | 26937063 ~ 26937266 (+) |
| G2217588 | NA | non-coding | downstream | 132342 | 26947950 ~ 26948189 (+) |
| G2217442 | NA | other | upstream | 206115 | 26607523 ~ 26607943 (+) |
| G2217159 | LOC106584278 | other | upstream | 681014 | 26127054 ~ 26133044 (+) |
| LOC110521611 | LOC106584283 | other | upstream | 1001752 | 25688091 ~ 25825503 (+) |
| LOC110522768 | LOC106584287 | other | upstream | 1225543 | 25566527 ~ 25590680 (+) |
| G2218483 | NA | other | downstream | 409766 | 27225374 ~ 27226305 (+) |
| LOC110521646 | LOC106584219 | other | downstream | 682269 | 27497328 ~ 27519290 (+) |
| LOC110521656 | LOC106584103 | other | downstream | 1022300 | 27823914 ~ 27844041 (+) |
| fip1l1a | fip1l1 | other | downstream | 1478287 | 28260830 ~ 28307538 (+) |
| G2219989 | LOC105940532 | other | downstream | 1731930 | 28547538 ~ 28548084 (+) |
