G2217389


Basic Information

Item Value
gene id G2217389
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 26951115 ~ 26951578 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2536293
ccctaaatatttctaaaagtaaatgcattgtatttggaacaaaacattcactaaaccctaaacctcaactaaatcttgttataaataatgtggaaattgagcaagttgagatcaaatcaaataaaatgttatttgtcacgtgcgctgaatacaacaggtgtagtagaccttacagtgaaatgcttacttacaggcgctaaccaatagtgcaaaaaaaggtattaggtgaacaatagttaggtaaagaaataaaacaacagtaaaaacacaggctatatacagtagccaggctataaaagtagcgaggttacatacagacaccggttagtcaggctgattgagctagtatgtacatatagatatggttaaagtgactatgcatatatgatgaacagagagtagcagtagcgtaaaagaggggttggtgggtgggacacaatgcagatagcccggttagccaatgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2536293 True 464 lncRNA 0.37 1 26951115 26951578

Neighbor

gene id symbol gene type direction distance location
plpp3 plpp3 coding upstream 44697 26847423 ~ 26906418 (+)
LOC110521632 LOC106584206 coding upstream 128783 26796202 ~ 26822332 (+)
LOC110521633 LOC106584207 coding upstream 155510 26695809 ~ 26795605 (+)
oma1 oma1 coding upstream 449563 26477035 ~ 26501552 (+)
LOC110521630 mysm1 coding upstream 472714 26457805 ~ 26478401 (+)
usp24 usp24 coding downstream 72360 27023938 ~ 27076744 (+)
dhcr24 dhcr24 coding downstream 148239 27099817 ~ 27122682 (+)
LOC110521639 tmm27 coding downstream 191427 27143005 ~ 27145888 (+)
LOC110522772 NA coding downstream 195774 27147352 ~ 27156672 (+)
LOC110521646 LOC106584219 coding downstream 545750 27497328 ~ 27519290 (+)
G2217589 NA non-coding upstream 2071 26948235 ~ 26949044 (+)
G2217588 NA non-coding upstream 2926 26947950 ~ 26948189 (+)
G2217579 NA non-coding upstream 13849 26937063 ~ 26937266 (+)
G2217571 NA non-coding upstream 32890 26918011 ~ 26918225 (+)
G2217567 NA non-coding upstream 37324 26913463 ~ 26913791 (+)
G2217598 NA non-coding downstream 11897 26963475 ~ 26963767 (+)
G2217600 NA non-coding downstream 13108 26964686 ~ 26964904 (+)
G2217601 NA non-coding downstream 14074 26965652 ~ 26966145 (+)
G2218192 NA non-coding downstream 20687 26972265 ~ 26972568 (+)
G2217442 NA other upstream 343172 26607523 ~ 26607943 (+)
G2217159 LOC106584278 other upstream 818071 26127054 ~ 26133044 (+)
LOC110521611 LOC106584283 other upstream 1138809 25688091 ~ 25825503 (+)
LOC110522768 LOC106584287 other upstream 1362600 25566527 ~ 25590680 (+)
G2218483 NA other downstream 273796 27225374 ~ 27226305 (+)
LOC110521656 LOC106584103 other downstream 886330 27823914 ~ 27844041 (+)
fip1l1a fip1l1 other downstream 1342317 28260830 ~ 28307538 (+)
G2219989 LOC105940532 other downstream 1595960 28547538 ~ 28548084 (+)

Expression


Co-expression Network