Gene
RNA
| Item | Value |
|---|---|
| gene id | G2219984 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 28541588 ~ 28541906 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2539158 | True | 319 | lncRNA | 0.46 | 1 | 28541588 | 28541906 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| gsx2 | gsx2 | coding | upstream | 8133 | 28531955 ~ 28533455 (+) |
| fip1l1a | fip1l1 | coding | upstream | 234050 | 28260830 ~ 28307538 (+) |
| LOC110521663 | rasl11b | coding | upstream | 445506 | 28093367 ~ 28096082 (+) |
| spata18 | spata18 | coding | upstream | 543697 | 27990515 ~ 27997891 (+) |
| LOC110521659 | LOC106584107 | coding | upstream | 570245 | 27962907 ~ 27971343 (+) |
| pdgfra | pdgfra | coding | downstream | 13477 | 28555383 ~ 28576642 (+) |
| LOC110521672 | kit | coding | downstream | 86010 | 28627916 ~ 28667914 (+) |
| srd5a3 | srd5a3 | coding | downstream | 223457 | 28765363 ~ 28768625 (+) |
| tmem165 | LOC106584122 | coding | downstream | 227326 | 28769232 ~ 28774166 (+) |
| exoc1 | exoc1 | coding | downstream | 369659 | 28911565 ~ 28925770 (+) |
| G2219983 | NA | non-coding | upstream | 187 | 28541165 ~ 28541401 (+) |
| G2219964 | NA | non-coding | upstream | 1889 | 28514969 ~ 28539699 (+) |
| G2219327 | NA | non-coding | upstream | 170575 | 28370647 ~ 28371013 (+) |
| G2219302 | lnx1 | non-coding | upstream | 203620 | 28335939 ~ 28337968 (+) |
| G2219228 | NA | non-coding | upstream | 293793 | 28233933 ~ 28247795 (+) |
| G2219990 | NA | non-coding | downstream | 6494 | 28548400 ~ 28548917 (+) |
| G2220025 | NA | non-coding | downstream | 60729 | 28602635 ~ 28602844 (+) |
| G2220026 | NA | non-coding | downstream | 64363 | 28606269 ~ 28606599 (+) |
| G2220031 | NA | non-coding | downstream | 72013 | 28613919 ~ 28614126 (+) |
| G2220223 | NA | non-coding | downstream | 410177 | 28952083 ~ 28952436 (+) |
| LOC110521656 | LOC106584103 | other | upstream | 697890 | 27823914 ~ 27844041 (+) |
| LOC110521646 | LOC106584219 | other | upstream | 1038908 | 27497328 ~ 27519290 (+) |
| G2218483 | NA | other | upstream | 1315283 | 27225374 ~ 27226305 (+) |
| LOC110521633 | LOC106584207 | other | upstream | 1789124 | 26695809 ~ 26795605 (+) |
| G2219989 | LOC105940532 | other | downstream | 5632 | 28547538 ~ 28548084 (+) |
| G2219991 | NA | other | downstream | 7123 | 28549029 ~ 28549478 (+) |
| G2220253 | NA | other | downstream | 479680 | 29021586 ~ 29021882 (+) |
| LOC110521703 | LOC106584150 | other | downstream | 2321918 | 30863624 ~ 30866524 (+) |
| G2225948 | NA | other | downstream | 5030234 | 33572140 ~ 33604894 (+) |
