LOC110504530


Basic Information

Item Value
gene id LOC110504530
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 9197710 ~ 9200039 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036970036.1
GCGCATGCGCTTTGATCCCCTcctattttattaaaaaaaataaaaatcagacGAAAATGGCTACCTTTCTCAGTTAAACCTCTGTCCTAGaagattaaataaagatgaaataccCGGCACATAATGTAAACCAGGATCAAGTCAATATCCATGGAATATAGGGCTTAGAATGCATCCGTTTGTATCATGATGTTGTGGCGGTCAAGAATGGAAAATCTATCCGTTTCATATTTAACCCATTGCATTCCATGATCCGCCTACAAATTAGAAAATGATGCACCAAGTCACTAGCAGCAGCAATGACTATTGCATGAGTGGCCTTGCAGAGGAATGTCAACACCCAACCAGCCACTTTGACTTATGTAGCTCGCAATCCAACAAATTCTACCCTTCGCCCCCACCCCCTACTCTACAGCTGCCTCGCCCTAACCTACCCACTCTTCCACAGGGCATGCACAAACCCATGCCGTGTCAAATGCAACAAGAGACCCAGAATGAGTTTCACGCTCAGACAGTGAGGATCCGAGGGCCCAGTGAGACTCCAACTGGGCCAGAGAGCTCCAAGAAAAAGAAAGGAAGCGTTGTCAAATCCGGCCGTAGAGGGAGACCCTCGGGGACCACTAAATCAGCCGGTTACCGGACAAGCACCGGACGTCCGTTGGGGACCACAAAAGCTGCGGGGTTCAAGACCAGTCCCGGCAGGCCTCTGGGTACAACCAAAGCAGCAGGCTACAAGGTTAGCCCTGGCAGGCCTCCTGGTAGCATCAAGACTCTGGCTCGGCTCAAGAAACTGGAGTACGGGAGCTGTGATGGTACCAAGAAACTAGACTTCAGTAACTGCGGCGGCGGAGCCAAGAAACTGGACTATGCCAGCTGTGAAGTGGCACCTTTCCCTTACAACCTGATGCAGAAACGAGGCTTGCGTGAGCCTACTGGCAAAGTGGAGGAAACTAACGAGTAGTTATGCCTGCGTCTCTATCTATTGCCTAGAACTCATATTTGAGTGCTTGTCCTAAAGGGTGTTGATGACCAGAAGGGACTCATGTAGCCAAAATATGGGTTGACTTTTGGATAGGTCTGTCACTGGCTACCTACGAAtggctcctcctctcttcattgTACTGATATCGTCAccatttaaccctaaccctaacccttttggATAGGTCTGTCACTGGCTACCTACGAAtggctcctcctctcttcattgTACTGATATCGTCACCATTTAATCTGTCCCTATCCAAAGACTGATAtcgctctctttttttttttctcaatacgTTTATCTTATTTTACAGAGATTGCATGATGAGACATATAATACAATCAATATACTTTAGCTAAACAGGAATGAGAGAAATATCCTACTATTCGTCATAATCTGTTCAAATGCTAGCTGTCTGGAGAAGGGTTGTTGTTTTGTTCAAACGTTTAAATATCTGATCTGTTTTCTTCATCCGTTTATGTTATGCTCTGATATAATGTGCTTTATTATTAGTAGTCTATTTGTCCTTCTGATGTTTTCCACATTGAAAAATGCATCGGGAGtagaaaacaacacaaaacaaactaGCAAAACGTGAATCTTAAGCTTCTCCCAGAGTGCATGTGGCTGTGTTTGTGTCTTTTTGTGTTGTCTGGTATGACATGTATTTCATTTGTGTTTATATGCAGCGTTGTGAGACATGGGACTGGATTCAATGTGGTATAACATTGTTATAACACAGTTTCTGTCATTTCGTTTGAACTGTGCATCTGAAAACCTCTCATAATACTTCTTTGACGACATAGCAATGGTTATTTCTAACACTTTGTAAATATTAATAGTTTTGTCTTCTCAATGTAATGTATTATTCTTTGTTCTTTACACGGTAACTTATCACTTGATTAAAGCAAACCCAGAATGAAA

Function

NR:

description
UPF0461 protein C5orf24 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036970036.1 True 1912 mRNA 0.43 2 9197710 9200039

Neighbor

gene id symbol gene type direction distance location
LOC110504362 LOC106604211 coding downstream 132 9153232 ~ 9197578 (-)
c1qtnf2 c1qtnf2 coding downstream 48794 9145591 ~ 9148916 (-)
LOC110504527 LOC106612241 coding downstream 52227 9106690 ~ 9145483 (-)
LOC110504524 LOC106612240 coding downstream 96799 9090505 ~ 9100911 (-)
LOC110504525 tmed9 coding downstream 107498 9086106 ~ 9090212 (-)
LOC110504532 LOC106612246 coding upstream 7138 9207177 ~ 9211391 (-)
LOC110504534 atp7a coding upstream 68539 9268578 ~ 9339744 (-)
atp10b atp10b coding upstream 159794 9359833 ~ 9417860 (-)
gabrb2a gabrb2 coding upstream 228944 9428983 ~ 9519457 (-)
gabra6a gabra6 coding upstream 321847 9521886 ~ 9547984 (-)
G2249621 NA non-coding downstream 41837 9155453 ~ 9155873 (-)
G2249508 NA non-coding downstream 46153 9151348 ~ 9151557 (-)
G2249507 NA non-coding downstream 46484 9150341 ~ 9151226 (-)
G2249497 NA non-coding downstream 63160 9134284 ~ 9134550 (-)
G2249613 NA non-coding upstream 16088 9216127 ~ 9218429 (-)
G2249646 sfxn1 non-coding upstream 24000 9224039 ~ 9228679 (-)
G2249654 NA non-coding upstream 34277 9234316 ~ 9234809 (-)
G2249668 NA non-coding upstream 91941 9291980 ~ 9293304 (-)
G2249671 NA non-coding upstream 96416 9296455 ~ 9297919 (-)
G2249506 NA other downstream 47569 9149888 ~ 9150141 (-)
G2248668 LOC106612284 other downstream 1040177 8153911 ~ 8157963 (-)
G2248522 NA other downstream 1156230 8040876 ~ 8041480 (-)
G2247813 NA other downstream 1941770 7255344 ~ 7255940 (-)
G2250247 NA other upstream 752278 9952317 ~ 9952703 (-)
G2250775 NA other upstream 1325752 10525791 ~ 10526568 (-)
G2251534 NA other upstream 1497153 10697192 ~ 10698407 (-)
G2251734 LOC100194703 other upstream 1887830 11087869 ~ 11092460 (-)
LOC118946018 NA other upstream 1979968 11180007 ~ 11183379 (-)

Expression


Co-expression Network