G2244850


Basic Information

Item Value
gene id G2244850
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 4176532 ~ 4177446 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2567019
ctgttaacACACCTCTTcctacacaccatacccactgtcaacacaccatacccactgttaacacaccatacccactgttaatacaccatacccactgttaacACACCTCTTCCTACTGTTAACACACCTCTTCCTACGcaccatacccactgttaacacaccatacccactgttaacacaccatacccactgttaatacaccatacccactgttaatacaccatacccactgttaatACACcatacccactgttaatacaccatacccactgttaatACACCTCTTcctacacaccatacccactgttaacacaccatacccactgttaacACACCATACCACTTCAGTTGTGTTCACTGTCGATGTAGCACCCCTACC
>TU2567020
gttaacgcaccatacccactgttaacGCACCTCTTCCTACTcaccatacccactgttaacacaccatacccactgttaacacaccatacccactgttaacacaccatacccactgttaacacaccatacccactgttaatacaccatacccactgttaacACACCTCTTCCTACGcaccatacccactgttaacacaccatacccactgttaacacaccatacccactgttaatacaccatacccactgttaatacaccatacccactgttaatACACcatacccactgttaatacaccatacccactgttaatACACCTCTTcctacacaccatacccactgttaacacaccatacccactgttaacACACCATACCACTTCAGTTGTGTTCACTGTCGATGTAGCACCCCTACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2567019 False 379 lncRNA 0.45 2 4176532 4177052
TU2567020 True 416 lncRNA 0.45 3 4176532 4177446

Neighbor

gene id symbol gene type direction distance location
higd2a LOC106612309 coding downstream 75816 4098767 ~ 4100716 (-)
LOC110489654 LOC104930052 coding downstream 118366 3968916 ~ 4058166 (-)
LOC118946073 NA coding downstream 207726 3967634 ~ 3968806 (-)
LOC118945987 NA coding downstream 619973 3554190 ~ 3556559 (-)
LOC110504452 LOC106592046 coding downstream 1434858 2713388 ~ 2741674 (-)
LOC110513918 syub coding upstream 58723 4236169 ~ 4290491 (-)
LOC110504469 LOC106612313 coding upstream 411987 4589433 ~ 4594305 (-)
LOC118945992 NA coding upstream 609993 4787439 ~ 4788320 (-)
LOC110504358 LOC106604155 coding upstream 1311283 5488729 ~ 5526792 (-)
LOC110504491 LOC106604157 coding upstream 1355413 5532859 ~ 5604780 (-)
G2244841 NA non-coding downstream 49 4153454 ~ 4176483 (-)
G2244828 NA non-coding downstream 40307 4120382 ~ 4136225 (-)
G2244810 NA non-coding downstream 57188 4094810 ~ 4119344 (-)
G2244812 NA non-coding downstream 59339 4111444 ~ 4117193 (-)
G2244826 LOC106612308 non-coding downstream 66293 4105643 ~ 4110239 (-)
G2244864 NA non-coding upstream 17098 4194544 ~ 4195508 (-)
G2244867 NA non-coding upstream 24730 4202176 ~ 4202382 (-)
G2244875 NA non-coding upstream 51643 4229089 ~ 4229298 (-)
G2244877 NA non-coding upstream 54071 4231517 ~ 4231751 (-)
G2244878 NA non-coding upstream 55999 4233445 ~ 4235329 (-)
G2244811 NA other downstream 63531 4111702 ~ 4113001 (-)
G2243801 NA other downstream 1238990 2936604 ~ 2937542 (-)
G2243777 NA other downstream 1289073 2885291 ~ 2887459 (-)
si:ch211-274f20.2 LOC106612323 other downstream 1591346 2575623 ~ 2585197 (-)
G2245152 ctnna1 other upstream 358395 4535841 ~ 4621990 (-)
G2246314 NA other upstream 1670673 5848119 ~ 5852599 (-)
G2247416 NA other upstream 2693141 6870587 ~ 6871100 (-)
G2247565 NA other upstream 2761177 6938623 ~ 7024539 (-)
G2247813 NA other upstream 3077898 7255344 ~ 7255940 (-)

Expression


Co-expression Network