G2246276


Basic Information

Item Value
gene id G2246276
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 5701779 ~ 5703010 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2568802
gacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagaccgacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacaggaccagacagacagacagacagacagacagaccgacagacagacagacagacagacagacagacagacagacagacagacagacagaccgacagaccgacagaccgacagaccgacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagaccgacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacaga
>TU2568803
accagacagacaggaccagacagacagacagacagacagacagacagacagacaggaccagacagacagacagacagacagacagacagacagacatacaggaccaggaccgacagaccgacagaccgacagaccgacagaccgacagaccgacagaccgacagacagacagacagacagacagacagacagacagacagacagacagacagacagaccgacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacaggaccaggaccagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagaccgacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacaga
>TU2568804
accagacagacaggaccagacagacagacagacagacagacagacagacagacaggaccagacagacagacagacagacagacagacagacagacatacaggaccaggaccgacagaccgacagaccgacagaccgacagacagacagacagacagacagacagacagacagacagacagaccgacagaccgacagaccgacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagaccgacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacaga
>TU2568806
accagacagacaggaccagacagacagacagacagacagacagacagacagacaggaccagacagacagacagacagacagacagacagacagacatacaggaccaggaccgacagaccgacagaccgacagaccgacagacagacagacagacagacagacagacagacagacagacagacagacagacagaccgacagacagacagacagacagacagacagacagacagacagacagacagacagacagaccgacagaccgacagaccgacagacagacagacagacagacagacagacagacagacagacagacagacagacagaccgacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacaga
>TU2568807
accagacagacaggaccagacagacagacagacagacagacagacagacagacaggaccagacagacagacagacagacagacagacagacagacatacaggaccaggaccgacagaccgacagaccgacagaccgacagacagacagacagacagacagacagacagacagacagacagacagacagaccgacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacaggaccaggaccagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagaccgacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2568802 False 388 lncRNA 0.52 3 5701779 5702669
TU2568803 False 457 lncRNA 0.53 3 5701779 5703010
TU2568804 False 337 lncRNA 0.53 3 5701779 5703010
TU2568806 False 397 lncRNA 0.53 4 5701779 5703010
TU2568807 True 429 lncRNA 0.52 2 5701779 5703010

Neighbor

gene id symbol gene type direction distance location
LOC110504491 LOC106604157 coding downstream 96999 5532859 ~ 5604780 (-)
LOC110504358 LOC106604155 coding downstream 174987 5488729 ~ 5526792 (-)
LOC118945992 NA coding downstream 913459 4787439 ~ 4788320 (-)
LOC110504469 LOC106612313 coding downstream 1107474 4589433 ~ 4594305 (-)
LOC110513918 syub coding downstream 1411288 4236169 ~ 4290491 (-)
LOC110504359 LOC106612272 coding upstream 4408 5707418 ~ 5731006 (-)
LOC118946011 NA coding upstream 36284 5739294 ~ 5740052 (-)
LOC110504499 LOC106604166 coding upstream 413104 6116114 ~ 6422429 (-)
LOC110504506 LOC106612265 coding upstream 1424859 7127869 ~ 7201500 (-)
LOC110504480 LOC106612296 coding upstream 1995173 7698183 ~ 7725792 (-)
G2246275 NA non-coding downstream 2222 5699352 ~ 5699557 (-)
G2246274 NA non-coding downstream 3155 5698411 ~ 5698624 (-)
G2246247 NA non-coding downstream 63506 5637995 ~ 5638273 (-)
G2246104 NA non-coding downstream 68040 5633493 ~ 5633739 (-)
G2246100 NA non-coding downstream 71914 5629631 ~ 5629865 (-)
G2246252 NA non-coding upstream 74796 5777806 ~ 5779449 (-)
G2246299 NA non-coding upstream 86719 5789729 ~ 5790048 (-)
G2246311 NA non-coding upstream 103391 5806401 ~ 5806606 (-)
G2246336 NA non-coding upstream 162222 5865232 ~ 5865567 (-)
G2245152 ctnna1 other downstream 1079789 4535841 ~ 4621990 (-)
G2244811 NA other downstream 1588778 4111702 ~ 4113001 (-)
higd2a LOC106612309 other downstream 1601107 4098767 ~ 4100716 (-)
G2243801 NA other downstream 2764237 2936604 ~ 2937542 (-)
G2243777 NA other downstream 2814320 2885291 ~ 2887459 (-)
G2246314 NA other upstream 145109 5848119 ~ 5852599 (-)
G2247416 NA other upstream 1167577 6870587 ~ 6871100 (-)
G2247565 NA other upstream 1235613 6938623 ~ 7024539 (-)
G2247813 NA other upstream 1552334 7255344 ~ 7255940 (-)
G2248522 NA other upstream 2337866 8040876 ~ 8041480 (-)

Expression


Co-expression Network