G2246394


Basic Information

Item Value
gene id G2246394
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 5977938 ~ 5978879 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2568977
GCGTAGTCTTTCACTTTAAAGAAGTTTCTGCTGTGCAAAATTTACTGTAGTATACATActcagaagaaaaagaagaagacaaagaagaagaagacaaagaagtaGAAGACAGAGAAGTagaagacagagaagaagaagaagacaaagaagaagtagaagacagagaagaagaagaagacaaagaagtagaagaagacagagaagtagaagacagagaagaagaagacagaggaagaagaagacaaagaagtagaagaagacagaagtagaagaagacagagaagaagaagaagacaaagaagaagaagaagacaaagaagaagaagacagagaagaagaaaaagacaaagaagaagaagaagactttATTGTACACAGATGTTCAGCAGAAACTAGTCTTCTGCTTTATTGGAATGGAGTGGAATTGATCATTTCTGAAAATGTGTGGTTCTAAGAATGTACAATATGAGATGGTATGTTACAATTGACTGGTCTCTCTCACTGCTAACAATCCCCGATTGACTGGTCTCTCACTGCTAACAATCCCCGATTGACTGGTCTCTCACTGCTAACAATCCCCGATTGACTGTGTTTTCACCTCATGCTCTAAGGCAGACCAACACAACCCTACTAAGCCAACATGTTCTCCCATGGCAATTGAATGTTCTCAAAGTTTAAGCTTAGAGAGGACACAATGGAATCTAACATTATGTCTTTGAATAATTAGTACCTTGTGCTTTGTTTGAAACCACATTCCCTGTGGCAAACGGCCATCAATAAAAACAGCCTTTCATCTTGATATGCTATACATGCATTGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2568977 True 819 lncRNA 0.38 2 5977938 5978879

Neighbor

gene id symbol gene type direction distance location
LOC118946011 NA coding downstream 237886 5739294 ~ 5740052 (-)
LOC110504359 LOC106612272 coding downstream 246932 5707418 ~ 5731006 (-)
LOC110504491 LOC106604157 coding downstream 373158 5532859 ~ 5604780 (-)
LOC110504358 LOC106604155 coding downstream 451146 5488729 ~ 5526792 (-)
LOC118945992 NA coding downstream 1189618 4787439 ~ 4788320 (-)
LOC110504499 LOC106604166 coding upstream 137235 6116114 ~ 6422429 (-)
LOC110504506 LOC106612265 coding upstream 1148990 7127869 ~ 7201500 (-)
LOC110504480 LOC106612296 coding upstream 1719304 7698183 ~ 7725792 (-)
LOC110504483 LOC106612297 coding upstream 1856364 7835243 ~ 7849870 (-)
LOC110504356 LOC106612292 coding upstream 1879246 7858125 ~ 7871099 (-)
G2246374 NA non-coding downstream 40773 5936249 ~ 5937165 (-)
G2246354 NA non-coding downstream 85602 5891894 ~ 5892336 (-)
G2246336 NA non-coding downstream 112371 5865232 ~ 5865567 (-)
G2246311 NA non-coding downstream 171332 5806401 ~ 5806606 (-)
G2246299 NA non-coding downstream 187890 5789729 ~ 5790048 (-)
G2246398 NA non-coding upstream 7515 5986394 ~ 5986594 (-)
G2246400 NA non-coding upstream 8804 5987683 ~ 5987980 (-)
G2246403 NA non-coding upstream 20376 5999255 ~ 5999479 (-)
G2246484 NA non-coding upstream 110136 6089015 ~ 6089322 (-)
G2246314 NA other downstream 125339 5848119 ~ 5852599 (-)
G2245152 ctnna1 other downstream 1355948 4535841 ~ 4621990 (-)
G2244811 NA other downstream 1864937 4111702 ~ 4113001 (-)
higd2a LOC106612309 other downstream 1877266 4098767 ~ 4100716 (-)
G2243801 NA other downstream 3040396 2936604 ~ 2937542 (-)
G2247416 NA other upstream 891708 6870587 ~ 6871100 (-)
G2247565 NA other upstream 959744 6938623 ~ 7024539 (-)
G2247813 NA other upstream 1276465 7255344 ~ 7255940 (-)
G2248522 NA other upstream 2061997 8040876 ~ 8041480 (-)
G2248668 LOC106612284 other upstream 2175032 8153911 ~ 8157963 (-)

Expression


Co-expression Network