Gene
RNA
| Item | Value |
|---|---|
| gene id | G2247416 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 6870587 ~ 6871100 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: collagen alpha-1(IV) chain-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2570139 | True | 514 | TUCP | 0.51 | 1 | 6870587 | 6871100 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504499 | LOC106604166 | coding | downstream | 448158 | 6116114 ~ 6422429 (-) |
| LOC118946011 | NA | coding | downstream | 1130535 | 5739294 ~ 5740052 (-) |
| LOC110504359 | LOC106612272 | coding | downstream | 1139581 | 5707418 ~ 5731006 (-) |
| LOC110504491 | LOC106604157 | coding | downstream | 1265807 | 5532859 ~ 5604780 (-) |
| LOC110504358 | LOC106604155 | coding | downstream | 1343795 | 5488729 ~ 5526792 (-) |
| LOC110504506 | LOC106612265 | coding | upstream | 256769 | 7127869 ~ 7201500 (-) |
| LOC110504480 | LOC106612296 | coding | upstream | 827083 | 7698183 ~ 7725792 (-) |
| LOC110504483 | LOC106612297 | coding | upstream | 964143 | 7835243 ~ 7849870 (-) |
| LOC110504356 | LOC106612292 | coding | upstream | 987025 | 7858125 ~ 7871099 (-) |
| LOC110504484 | smad5 | coding | upstream | 1000794 | 7871894 ~ 7892178 (-) |
| G2247381 | NA | non-coding | downstream | 38388 | 6831938 ~ 6832199 (-) |
| G2247380 | NA | non-coding | downstream | 38877 | 6831250 ~ 6831710 (-) |
| G2247339 | NA | non-coding | downstream | 89632 | 6780508 ~ 6780955 (-) |
| G2247317 | NA | non-coding | downstream | 124662 | 6745215 ~ 6745925 (-) |
| G2247290 | NA | non-coding | downstream | 159893 | 6709849 ~ 6710694 (-) |
| G2247432 | NA | non-coding | upstream | 30726 | 6901826 ~ 6902095 (-) |
| G2247434 | NA | non-coding | upstream | 33751 | 6904851 ~ 6905120 (-) |
| G2247444 | NA | non-coding | upstream | 38863 | 6909963 ~ 6910165 (-) |
| G2247460 | NA | non-coding | upstream | 53065 | 6924165 ~ 6924791 (-) |
| G2247650 | NA | non-coding | upstream | 212789 | 7083889 ~ 7084213 (-) |
| G2246314 | NA | other | downstream | 1017988 | 5848119 ~ 5852599 (-) |
| G2245152 | ctnna1 | other | downstream | 2248597 | 4535841 ~ 4621990 (-) |
| G2244811 | NA | other | downstream | 2757586 | 4111702 ~ 4113001 (-) |
| higd2a | LOC106612309 | other | downstream | 2769915 | 4098767 ~ 4100716 (-) |
| G2243801 | NA | other | downstream | 3933045 | 2936604 ~ 2937542 (-) |
| G2247565 | NA | other | upstream | 67523 | 6938623 ~ 7024539 (-) |
| G2247813 | NA | other | upstream | 384244 | 7255344 ~ 7255940 (-) |
| G2248522 | NA | other | upstream | 1169776 | 8040876 ~ 8041480 (-) |
| G2248668 | LOC106612284 | other | upstream | 1282811 | 8153911 ~ 8157963 (-) |
| c1qtnf2 | c1qtnf2 | other | upstream | 2275691 | 9145591 ~ 9148916 (-) |
