Gene
RNA
| Item | Value |
|---|---|
| gene id | G2248143 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 7601756 ~ 7602312 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2571008 | False | 236 | lncRNA | 0.56 | 3 | 7601756 | 7602312 |
| TU2571007 | True | 216 | lncRNA | 0.57 | 3 | 7601842 | 7602312 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504506 | LOC106612265 | coding | downstream | 400256 | 7127869 ~ 7201500 (-) |
| LOC110504499 | LOC106604166 | coding | downstream | 1179327 | 6116114 ~ 6422429 (-) |
| LOC118946011 | NA | coding | downstream | 1861704 | 5739294 ~ 5740052 (-) |
| LOC110504359 | LOC106612272 | coding | downstream | 1870750 | 5707418 ~ 5731006 (-) |
| LOC110504491 | LOC106604157 | coding | downstream | 1996976 | 5532859 ~ 5604780 (-) |
| LOC110504480 | LOC106612296 | coding | upstream | 95871 | 7698183 ~ 7725792 (-) |
| LOC110504483 | LOC106612297 | coding | upstream | 232931 | 7835243 ~ 7849870 (-) |
| LOC110504356 | LOC106612292 | coding | upstream | 255813 | 7858125 ~ 7871099 (-) |
| LOC110504484 | smad5 | coding | upstream | 269582 | 7871894 ~ 7892178 (-) |
| LOC110504485 | tgfbi | coding | upstream | 294399 | 7896711 ~ 7926759 (-) |
| G2248135 | NA | non-coding | downstream | 8631 | 7592466 ~ 7593125 (-) |
| G2248121 | NA | non-coding | downstream | 38200 | 7561491 ~ 7563556 (-) |
| G2248073 | NA | non-coding | downstream | 146515 | 7454337 ~ 7455241 (-) |
| G2248032 | NA | non-coding | downstream | 216015 | 7384665 ~ 7385741 (-) |
| G2248012 | NA | non-coding | downstream | 254473 | 7347060 ~ 7347283 (-) |
| G2248388 | NA | non-coding | upstream | 132814 | 7735126 ~ 7735611 (-) |
| G2248354 | NA | non-coding | upstream | 183326 | 7785638 ~ 7786454 (-) |
| G2248407 | NA | non-coding | upstream | 192030 | 7794342 ~ 7794593 (-) |
| G2248418 | NA | non-coding | upstream | 233936 | 7836248 ~ 7837026 (-) |
| G2247813 | NA | other | downstream | 345816 | 7255344 ~ 7255940 (-) |
| G2247565 | NA | other | downstream | 577217 | 6938623 ~ 7024539 (-) |
| G2247416 | NA | other | downstream | 730656 | 6870587 ~ 6871100 (-) |
| G2246314 | NA | other | downstream | 1749157 | 5848119 ~ 5852599 (-) |
| G2245152 | ctnna1 | other | downstream | 2979766 | 4535841 ~ 4621990 (-) |
| G2248522 | NA | other | upstream | 438564 | 8040876 ~ 8041480 (-) |
| G2248668 | LOC106612284 | other | upstream | 551599 | 8153911 ~ 8157963 (-) |
| c1qtnf2 | c1qtnf2 | other | upstream | 1544479 | 9145591 ~ 9148916 (-) |
| G2249506 | NA | other | upstream | 1547576 | 9149888 ~ 9150141 (-) |
| G2250247 | NA | other | upstream | 2350005 | 9952317 ~ 9952703 (-) |
