Gene
RNA
| Item | Value |
|---|---|
| gene id | G2248432 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 7851365 ~ 7851589 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2571343 | True | 225 | lncRNA | 0.40 | 1 | 7851365 | 7851589 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504483 | LOC106612297 | coding | downstream | 1495 | 7835243 ~ 7849870 (-) |
| LOC110504480 | LOC106612296 | coding | downstream | 125573 | 7698183 ~ 7725792 (-) |
| LOC110504506 | LOC106612265 | coding | downstream | 649865 | 7127869 ~ 7201500 (-) |
| LOC110504499 | LOC106604166 | coding | downstream | 1428936 | 6116114 ~ 6422429 (-) |
| LOC118946011 | NA | coding | downstream | 2111313 | 5739294 ~ 5740052 (-) |
| LOC110504356 | LOC106612292 | coding | upstream | 6536 | 7858125 ~ 7871099 (-) |
| LOC110504484 | smad5 | coding | upstream | 20305 | 7871894 ~ 7892178 (-) |
| LOC110504485 | tgfbi | coding | upstream | 45122 | 7896711 ~ 7926759 (-) |
| LOC110504508 | LOC106612286 | coding | upstream | 239445 | 8091034 ~ 8104745 (-) |
| LOC110504516 | LOC106612282 | coding | upstream | 321632 | 8173221 ~ 8224552 (-) |
| G2248436 | NA | non-coding | downstream | 316 | 7850743 ~ 7851049 (-) |
| G2248418 | NA | non-coding | downstream | 14339 | 7836248 ~ 7837026 (-) |
| G2248407 | NA | non-coding | downstream | 56772 | 7794342 ~ 7794593 (-) |
| G2248354 | NA | non-coding | downstream | 64911 | 7785638 ~ 7786454 (-) |
| G2248439 | NA | non-coding | upstream | 12026 | 7863615 ~ 7864572 (-) |
| G2248456 | NA | non-coding | upstream | 76937 | 7928526 ~ 7929157 (-) |
| G2248500 | LOC106594768 | non-coding | upstream | 161771 | 8013360 ~ 8016525 (-) |
| G2248510 | NA | non-coding | upstream | 170731 | 8022320 ~ 8024911 (-) |
| G2248514 | NA | non-coding | upstream | 184419 | 8036008 ~ 8036219 (-) |
| G2247813 | NA | other | downstream | 595425 | 7255344 ~ 7255940 (-) |
| G2247565 | NA | other | downstream | 826826 | 6938623 ~ 7024539 (-) |
| G2247416 | NA | other | downstream | 980265 | 6870587 ~ 6871100 (-) |
| G2246314 | NA | other | downstream | 1998766 | 5848119 ~ 5852599 (-) |
| G2245152 | ctnna1 | other | downstream | 3229375 | 4535841 ~ 4621990 (-) |
| G2248522 | NA | other | upstream | 189287 | 8040876 ~ 8041480 (-) |
| G2248668 | LOC106612284 | other | upstream | 302322 | 8153911 ~ 8157963 (-) |
| c1qtnf2 | c1qtnf2 | other | upstream | 1295202 | 9145591 ~ 9148916 (-) |
| G2249506 | NA | other | upstream | 1298299 | 9149888 ~ 9150141 (-) |
| G2250247 | NA | other | upstream | 2100728 | 9952317 ~ 9952703 (-) |
