G2248456


Basic Information

Item Value
gene id G2248456
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 7928526 ~ 7929157 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2571369
atgtaatgtaaatgtgtcaGTCTGCCTGGCAGTGTAACCTTGAtgatgtaatgtaaatgtgtcaGTCTGCCTGGCAGTGTAACCTTGAtgatgtaatgtaaatgtgtcaGTCTGCCTAGCAGCGTAACCTTGAtgatgtaatgtaaatgtgtcaGTCTGCCTGGCAGCGTAACCTTGAtgatgtaatgtaaatgtgtcaGTCTGCCTGGCAGCGTAACCTTGAtgatgtaatgtaaatgtgtcaGTCCGCCTGGCAGTGTAACCTTGATGATGTAATGTAAAAGTGTCAGTCTGTGTAACCTTGAtgatgtaatgtaaatgtgtcaGTCTGCCTGGCAGTGTAACCTTGAtgatgtaatgtaaatgtgtcaGTCTGCCTGGCAGTGTAACCTTGAtgatgtaatgtaaatgtgtcaGTCTGCCTGGCAGTGTAACCTTGAtgatgtaatgtaaatgtgtcaGTCTGCCTGGCAGTGTAACCTTGAtgatgtaatgtaaatgtgtcaGTCTGCCTGACAGTGTAACCTTGAtgatgtaatgtaaatgtgtcaGTCTGTGTAACCTTGATGATGTCATGTAAATGTGTCAGTCTGTGTAACCTTGAtgatgtaatgtaaatgtgtcaGTCCACC

Function

NR:

description
PREDICTED: hornerin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2571369 True 632 lncRNA 0.41 1 7928526 7929157

Neighbor

gene id symbol gene type direction distance location
LOC110504485 tgfbi coding downstream 1767 7896711 ~ 7926759 (-)
LOC110504484 smad5 coding downstream 36348 7871894 ~ 7892178 (-)
LOC110504356 LOC106612292 coding downstream 57427 7858125 ~ 7871099 (-)
LOC110504483 LOC106612297 coding downstream 78656 7835243 ~ 7849870 (-)
LOC110504480 LOC106612296 coding downstream 202734 7698183 ~ 7725792 (-)
LOC110504508 LOC106612286 coding upstream 161877 8091034 ~ 8104745 (-)
LOC110504516 LOC106612282 coding upstream 244064 8173221 ~ 8224552 (-)
LOC110504517 LOC106604175 coding upstream 320375 8249532 ~ 8264238 (-)
LOC110504538 g3bp1 coding upstream 687807 8616964 ~ 8627201 (-)
sparc sparc coding upstream 708431 8637588 ~ 8656945 (-)
G2248439 NA non-coding downstream 63954 7863615 ~ 7864572 (-)
G2248432 NA non-coding downstream 76937 7851365 ~ 7851589 (-)
G2248436 NA non-coding downstream 77477 7850743 ~ 7851049 (-)
G2248418 NA non-coding downstream 91500 7836248 ~ 7837026 (-)
G2248500 LOC106594768 non-coding upstream 84203 8013360 ~ 8016525 (-)
G2248510 NA non-coding upstream 93163 8022320 ~ 8024911 (-)
G2248514 NA non-coding upstream 106851 8036008 ~ 8036219 (-)
G2248519 NA non-coding upstream 109887 8039044 ~ 8039284 (-)
G2248521 NA non-coding upstream 110287 8039444 ~ 8039649 (-)
G2247813 NA other downstream 672586 7255344 ~ 7255940 (-)
G2247565 NA other downstream 903987 6938623 ~ 7024539 (-)
G2247416 NA other downstream 1057426 6870587 ~ 6871100 (-)
G2246314 NA other downstream 2075927 5848119 ~ 5852599 (-)
G2245152 ctnna1 other downstream 3306536 4535841 ~ 4621990 (-)
G2248522 NA other upstream 111719 8040876 ~ 8041480 (-)
G2248668 LOC106612284 other upstream 224754 8153911 ~ 8157963 (-)
c1qtnf2 c1qtnf2 other upstream 1217634 9145591 ~ 9148916 (-)
G2249506 NA other upstream 1220731 9149888 ~ 9150141 (-)
G2250247 NA other upstream 2023160 9952317 ~ 9952703 (-)

Expression


Co-expression Network