Gene
RNA
| Item | Value |
|---|---|
| gene id | G2248514 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 8036008 ~ 8036219 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2571440 | True | 212 | lncRNA | 0.49 | 1 | 8036008 | 8036219 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504485 | tgfbi | coding | downstream | 109249 | 7896711 ~ 7926759 (-) |
| LOC110504484 | smad5 | coding | downstream | 143830 | 7871894 ~ 7892178 (-) |
| LOC110504356 | LOC106612292 | coding | downstream | 164909 | 7858125 ~ 7871099 (-) |
| LOC110504483 | LOC106612297 | coding | downstream | 186138 | 7835243 ~ 7849870 (-) |
| LOC110504480 | LOC106612296 | coding | downstream | 310216 | 7698183 ~ 7725792 (-) |
| LOC110504508 | LOC106612286 | coding | upstream | 54815 | 8091034 ~ 8104745 (-) |
| LOC110504516 | LOC106612282 | coding | upstream | 137002 | 8173221 ~ 8224552 (-) |
| LOC110504517 | LOC106604175 | coding | upstream | 213313 | 8249532 ~ 8264238 (-) |
| LOC110504538 | g3bp1 | coding | upstream | 580745 | 8616964 ~ 8627201 (-) |
| sparc | sparc | coding | upstream | 601369 | 8637588 ~ 8656945 (-) |
| G2248510 | NA | non-coding | downstream | 11097 | 8022320 ~ 8024911 (-) |
| G2248500 | LOC106594768 | non-coding | downstream | 19483 | 8013360 ~ 8016525 (-) |
| G2248456 | NA | non-coding | downstream | 106851 | 7928526 ~ 7929157 (-) |
| G2248439 | NA | non-coding | downstream | 171436 | 7863615 ~ 7864572 (-) |
| G2248432 | NA | non-coding | downstream | 184419 | 7851365 ~ 7851589 (-) |
| G2248519 | NA | non-coding | upstream | 2825 | 8039044 ~ 8039284 (-) |
| G2248521 | NA | non-coding | upstream | 3225 | 8039444 ~ 8039649 (-) |
| G2248708 | LOC106612280 | non-coding | upstream | 113328 | 8149547 ~ 8149918 (-) |
| G2248707 | NA | non-coding | upstream | 114092 | 8150311 ~ 8151684 (-) |
| G2248710 | NA | non-coding | upstream | 117158 | 8153377 ~ 8153688 (-) |
| G2247813 | NA | other | downstream | 780068 | 7255344 ~ 7255940 (-) |
| G2247565 | NA | other | downstream | 1011469 | 6938623 ~ 7024539 (-) |
| G2247416 | NA | other | downstream | 1164908 | 6870587 ~ 6871100 (-) |
| G2246314 | NA | other | downstream | 2183409 | 5848119 ~ 5852599 (-) |
| G2245152 | ctnna1 | other | downstream | 3414018 | 4535841 ~ 4621990 (-) |
| G2248522 | NA | other | upstream | 4657 | 8040876 ~ 8041480 (-) |
| G2248668 | LOC106612284 | other | upstream | 117692 | 8153911 ~ 8157963 (-) |
| c1qtnf2 | c1qtnf2 | other | upstream | 1110572 | 9145591 ~ 9148916 (-) |
| G2249506 | NA | other | upstream | 1113669 | 9149888 ~ 9150141 (-) |
| G2250247 | NA | other | upstream | 1916098 | 9952317 ~ 9952703 (-) |
