Gene
RNA
| Item | Value |
|---|---|
| gene id | G2248519 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 8039044 ~ 8039284 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2571447 | True | 241 | lncRNA | 0.35 | 1 | 8039044 | 8039284 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504485 | tgfbi | coding | downstream | 112285 | 7896711 ~ 7926759 (-) |
| LOC110504484 | smad5 | coding | downstream | 146866 | 7871894 ~ 7892178 (-) |
| LOC110504356 | LOC106612292 | coding | downstream | 167945 | 7858125 ~ 7871099 (-) |
| LOC110504483 | LOC106612297 | coding | downstream | 189174 | 7835243 ~ 7849870 (-) |
| LOC110504480 | LOC106612296 | coding | downstream | 313252 | 7698183 ~ 7725792 (-) |
| LOC110504508 | LOC106612286 | coding | upstream | 51750 | 8091034 ~ 8104745 (-) |
| LOC110504516 | LOC106612282 | coding | upstream | 133937 | 8173221 ~ 8224552 (-) |
| LOC110504517 | LOC106604175 | coding | upstream | 210248 | 8249532 ~ 8264238 (-) |
| LOC110504538 | g3bp1 | coding | upstream | 577680 | 8616964 ~ 8627201 (-) |
| sparc | sparc | coding | upstream | 598304 | 8637588 ~ 8656945 (-) |
| G2248514 | NA | non-coding | downstream | 2825 | 8036008 ~ 8036219 (-) |
| G2248510 | NA | non-coding | downstream | 14133 | 8022320 ~ 8024911 (-) |
| G2248500 | LOC106594768 | non-coding | downstream | 22519 | 8013360 ~ 8016525 (-) |
| G2248456 | NA | non-coding | downstream | 109887 | 7928526 ~ 7929157 (-) |
| G2248439 | NA | non-coding | downstream | 174472 | 7863615 ~ 7864572 (-) |
| G2248521 | NA | non-coding | upstream | 160 | 8039444 ~ 8039649 (-) |
| G2248708 | LOC106612280 | non-coding | upstream | 110263 | 8149547 ~ 8149918 (-) |
| G2248707 | NA | non-coding | upstream | 111027 | 8150311 ~ 8151684 (-) |
| G2248710 | NA | non-coding | upstream | 114093 | 8153377 ~ 8153688 (-) |
| G2248668 | LOC106612284 | non-coding | upstream | 117334 | 8153911 ~ 8157963 (-) |
| G2247813 | NA | other | downstream | 783104 | 7255344 ~ 7255940 (-) |
| G2247565 | NA | other | downstream | 1014505 | 6938623 ~ 7024539 (-) |
| G2247416 | NA | other | downstream | 1167944 | 6870587 ~ 6871100 (-) |
| G2246314 | NA | other | downstream | 2186445 | 5848119 ~ 5852599 (-) |
| G2245152 | ctnna1 | other | downstream | 3417054 | 4535841 ~ 4621990 (-) |
| G2248522 | NA | other | upstream | 1592 | 8040876 ~ 8041480 (-) |
| c1qtnf2 | c1qtnf2 | other | upstream | 1107507 | 9145591 ~ 9148916 (-) |
| G2249506 | NA | other | upstream | 1110604 | 9149888 ~ 9150141 (-) |
| G2250247 | NA | other | upstream | 1913033 | 9952317 ~ 9952703 (-) |
