Gene
RNA
| Item | Value |
|---|---|
| gene id | G2248711 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 8158884 ~ 8159274 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2571697 | True | 391 | lncRNA | 0.36 | 1 | 8158884 | 8159274 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504508 | LOC106612286 | coding | downstream | 54139 | 8091034 ~ 8104745 (-) |
| LOC110504485 | tgfbi | coding | downstream | 232125 | 7896711 ~ 7926759 (-) |
| LOC110504484 | smad5 | coding | downstream | 266706 | 7871894 ~ 7892178 (-) |
| LOC110504356 | LOC106612292 | coding | downstream | 287785 | 7858125 ~ 7871099 (-) |
| LOC110504483 | LOC106612297 | coding | downstream | 309014 | 7835243 ~ 7849870 (-) |
| LOC110504516 | LOC106612282 | coding | upstream | 13947 | 8173221 ~ 8224552 (-) |
| LOC110504517 | LOC106604175 | coding | upstream | 90258 | 8249532 ~ 8264238 (-) |
| LOC110504538 | g3bp1 | coding | upstream | 457690 | 8616964 ~ 8627201 (-) |
| sparc | sparc | coding | upstream | 478314 | 8637588 ~ 8656945 (-) |
| LOC110504555 | atox1 | coding | upstream | 519477 | 8678751 ~ 8681239 (-) |
| G2248668 | LOC106612284 | non-coding | downstream | 921 | 8153911 ~ 8157963 (-) |
| G2248710 | NA | non-coding | downstream | 5196 | 8153377 ~ 8153688 (-) |
| G2248707 | NA | non-coding | downstream | 7200 | 8150311 ~ 8151684 (-) |
| G2248708 | LOC106612280 | non-coding | downstream | 8966 | 8149547 ~ 8149918 (-) |
| G2248521 | NA | non-coding | downstream | 119235 | 8039444 ~ 8039649 (-) |
| G2248712 | NA | non-coding | upstream | 199 | 8159473 ~ 8160386 (-) |
| G2248713 | NA | non-coding | upstream | 1799 | 8161073 ~ 8161952 (-) |
| G2248714 | NA | non-coding | upstream | 3591 | 8162865 ~ 8164105 (-) |
| G2248715 | NA | non-coding | upstream | 4895 | 8164169 ~ 8164693 (-) |
| G2248716 | NA | non-coding | upstream | 5595 | 8164869 ~ 8165404 (-) |
| G2248522 | NA | other | downstream | 117404 | 8040876 ~ 8041480 (-) |
| G2247813 | NA | other | downstream | 902944 | 7255344 ~ 7255940 (-) |
| G2247565 | NA | other | downstream | 1134345 | 6938623 ~ 7024539 (-) |
| G2247416 | NA | other | downstream | 1287784 | 6870587 ~ 6871100 (-) |
| c1qtnf2 | c1qtnf2 | other | upstream | 987517 | 9145591 ~ 9148916 (-) |
| G2249506 | NA | other | upstream | 990614 | 9149888 ~ 9150141 (-) |
| G2250247 | NA | other | upstream | 1793043 | 9952317 ~ 9952703 (-) |
| G2250775 | NA | other | upstream | 2366517 | 10525791 ~ 10526568 (-) |
| G2251534 | NA | other | upstream | 2537918 | 10697192 ~ 10698407 (-) |
