G2248714


Basic Information

Item Value
gene id G2248714
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 8162865 ~ 8164105 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2571700
caaaaaacgtacgttcccacaacttcaaAGGAACCACATGTGCTAGCTGGGAAGATGGAGGAAAACAGTCAGTGCTCAGTAATCATCCAATTCAACTGCTGTTAAAGAAGGTTTTTGGGTTGAAAAATGTACTGTTAAAGAAGGTTTTTGGGGTTGAAAAATGTACTGTTAAAGAAGGTTTTTGGGGTTGAAAAATGTACTGTTAAAGAAGGTTTTTGGGGTTGAAAAATGTACTGTTAAAGAAGGTTTTTGGGTTGAAAAATGTACTGTTAAAGAAGCATAGGGCCGGTTTTCTGAATCCAGATTAGGCCTATTCCCGGACTGAAAAGCATGATGCTCAATGGAGACACACATTTCCAGTAAAACATCAGTTCCAAGTACACAACACCGTCATGCTCTGTCACATCATCTTGAATGCCTGTTACCTGATGTATTGATCGAAGCAGACCACCTGGCTCACACCATATATTTAAATGTATACACACGCGTCTAAACAAAACCAATATCTATCTAACCTCCAGATGCTATTTAGAATGTACAAAGGTCATTCTGTTTTCTTCCAATCATATTACTGGAATCAATCATCGTCCATCTTGAGAGCAGACCAAAGGCTTTATTTGGTAATTGTGTCGTGTCTGGAAGGGTTGAGGAGGCTGGGGGTTGTGAGTTATATTTCGATTTATCATGATTAGTAGCTAGTGAGAGAATGGGGAATCGGGGGTGGGGGTAGTTTAGTCTGGCGGAGCTTTTCCTTTCAAATGTTGTTTTGTGAAGAGCATGGTGTCCAAGGCTACGCTGAGGGTATTAGATAACCCTAACTATCAGAAATCAGTGGGTAGTCGTCGTGAGTTGCATGGTTGGggtcaattacatttcaattccGGTCAATTCAgatcctacagtgccttcagagtaGTCACCactcttgaccttttccacatgttgttgtgttacagcctgaatttaaaatttatcaaatgtagatttgttttgtcattggtctacacacaataccccataatgtcaaagtggaattattattattaatatttgttttaaatgtttacaatttaatttaaaaaaggaaaaactgaaatgtcttgagccaATAGGTATTCTCTTGGGgtggcagtgtagcctagtggttagagcattggactagtaactggaaggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2571700 True 1174 lncRNA 0.39 2 8162865 8164105

Neighbor

gene id symbol gene type direction distance location
LOC110504508 LOC106612286 coding downstream 58120 8091034 ~ 8104745 (-)
LOC110504485 tgfbi coding downstream 236106 7896711 ~ 7926759 (-)
LOC110504484 smad5 coding downstream 270687 7871894 ~ 7892178 (-)
LOC110504356 LOC106612292 coding downstream 291766 7858125 ~ 7871099 (-)
LOC110504483 LOC106612297 coding downstream 312995 7835243 ~ 7849870 (-)
LOC110504516 LOC106612282 coding upstream 9116 8173221 ~ 8224552 (-)
LOC110504517 LOC106604175 coding upstream 85427 8249532 ~ 8264238 (-)
LOC110504538 g3bp1 coding upstream 452859 8616964 ~ 8627201 (-)
sparc sparc coding upstream 473483 8637588 ~ 8656945 (-)
LOC110504555 atox1 coding upstream 514646 8678751 ~ 8681239 (-)
G2248713 NA non-coding downstream 913 8161073 ~ 8161952 (-)
G2248712 NA non-coding downstream 2479 8159473 ~ 8160386 (-)
G2248711 NA non-coding downstream 3591 8158884 ~ 8159274 (-)
G2248668 LOC106612284 non-coding downstream 4902 8153911 ~ 8157963 (-)
G2248710 NA non-coding downstream 9177 8153377 ~ 8153688 (-)
G2248715 NA non-coding upstream 64 8164169 ~ 8164693 (-)
G2248716 NA non-coding upstream 764 8164869 ~ 8165404 (-)
G2248717 NA non-coding upstream 3679 8167784 ~ 8172279 (-)
G2248732 NA non-coding upstream 43449 8207554 ~ 8213085 (-)
G2248522 NA other downstream 121385 8040876 ~ 8041480 (-)
G2247813 NA other downstream 906925 7255344 ~ 7255940 (-)
G2247565 NA other downstream 1138326 6938623 ~ 7024539 (-)
G2247416 NA other downstream 1291765 6870587 ~ 6871100 (-)
c1qtnf2 c1qtnf2 other upstream 982686 9145591 ~ 9148916 (-)
G2249506 NA other upstream 985783 9149888 ~ 9150141 (-)
G2250247 NA other upstream 1788212 9952317 ~ 9952703 (-)
G2250775 NA other upstream 2361686 10525791 ~ 10526568 (-)
G2251534 NA other upstream 2533087 10697192 ~ 10698407 (-)

Expression


Co-expression Network