G2267999 (LOC106611703)


Basic Information

Item Value
gene id G2267999
gene name LOC106611703
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 28073526 ~ 28078028 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2594491
ccccccccccctggtcccCGGTACAGGCCCCCTGCTCCACCGTGGCCGCTGTAGTCCTGGAAGTTAGGCAGggtcttctgtctcttcctctgcacTTCTTCCTTATCTATGATCTGCGGATGGTAGGTGAAGGGCTTGGGCTCGCTCGTCTCATTGTCCGATTTACGCTTCAGCTGCACAAACACCGAGGTGGGTTTCTGGAGGTTCAGGTCTCTGTATTTGGGGGTCTTGAAAACAATGGCAAACTGTCGGTGGACATCGGTGGGGGAGAAGTCCCCAAAGGCCTCCCATGTCAGCCCTGTCTCGTCATCCTCATAGAAGCGCACCTGGATGTCGAAGATGGGGTCTGATATGACGGGGTCCAGTCTACGGGAGAAGCCCCCGTCACTGTCTGGGAGGAAGGCTGTGAACATGAGGCGCACCACGCTCAGGTCCATCTCTTTAGCCTGGTAGGACGCTGCGCTGCTGATCAGATTTCTCTGGtgatCAGTGAGCTCTCGGGGGATGCGGAACTCTCCCTGGAAGGCGTCCATCTCGGGATGGATGACGATACCACAGTTGTAGCCCATCCTGTAGGCCTCAGACATACGGTCCTCCAGTGTCTTACTCACGTTCTTCTTGGTCACGTGGAGGATGCCCAAGTTGGGGAAACTGTCACATGGAGATATTGATTTATATGTGGTACGTTTTTAACCCTGTACGCTTGTGGA

Function

NR:

description
PREDICTED: nuclear factor NF-kappa-B p105 subunit-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2594491 True 710 lncRNA 0.55 5 28073526 28078028

Neighbor

gene id symbol gene type direction distance location
LOC110504919 LOC106611705 coding upstream 7799 28057412 ~ 28065727 (+)
LOC118946038 NA coding upstream 17101 28054388 ~ 28056425 (+)
LOC110504914 LOC106611700 coding upstream 63204 27987952 ~ 28010322 (+)
LOC110504912 LOC106611698 coding upstream 111707 27958738 ~ 27961819 (+)
LOC110504911 NA coding upstream 119378 27953112 ~ 27954152 (+)
trmt12 LOC106611794 coding downstream 77393 28155421 ~ 28163913 (+)
sytl4 LOC106611707 coding downstream 92433 28170461 ~ 28188340 (+)
LOC110504926 tsn7 coding downstream 120645 28198673 ~ 28209723 (+)
LOC110504927 NA coding downstream 147409 28225437 ~ 28244563 (+)
LOC110504299 NA coding downstream 178418 28256446 ~ 28307408 (+)
G2267994 NA non-coding upstream 2768 28068625 ~ 28070758 (+)
G2267923 NA non-coding upstream 42615 28029705 ~ 28030911 (+)
G2267978 NA non-coding upstream 48339 28024967 ~ 28025187 (+)
G2267930 NA non-coding upstream 51737 28021060 ~ 28021789 (+)
G2267925 NA non-coding upstream 58651 28014126 ~ 28014875 (+)
G2268035 LOC106611706 non-coding downstream 48713 28126741 ~ 28127553 (+)
G2268036 NA non-coding downstream 57513 28135541 ~ 28135887 (+)
G2268037 NA non-coding downstream 58132 28136160 ~ 28136441 (+)
G2268038 NA non-coding downstream 58492 28136520 ~ 28136724 (+)
G2268058 NA non-coding downstream 90206 28168234 ~ 28168601 (+)
G2266826 NA other upstream 1137637 26934720 ~ 26935889 (+)
G2266668 LOC106611853 other upstream 1452578 26588592 ~ 26620948 (+)
LOC110504416 diaph1 other upstream 1701043 26298775 ~ 26483992 (+)
LOC118946064 NA other upstream 1781522 26289725 ~ 26292004 (+)
G2265744 NA other upstream 2094888 25978135 ~ 25978638 (+)
G2268340 NA other downstream 688849 28766877 ~ 28767729 (+)
G2268400 LOC106611722 other downstream 818727 28896755 ~ 28898079 (+)
G2271027 NA other downstream 3098862 31176890 ~ 31181107 (+)
G2272912 LOC106611792 other downstream 4785408 32863436 ~ 32866226 (+)
LOC110505056 LOC105028844 other downstream 5338062 33328263 ~ 33421963 (+)

Expression


Co-expression Network